Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 LINC01311-201ENST00000565162 1445 ntBASIC17.3■□□□□ 0.36
UBE2E3Q969T4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.3■□□□□ 0.36
UBE2E3Q969T4 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
UBE2E3Q969T4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBE2E3Q969T4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
UBE2E3Q969T4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBE2E3Q969T4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
UBE2E3Q969T4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBE2E3Q969T4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBE2E3Q969T4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UBE2E3Q969T4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.3■□□□□ 0.36
UBE2E3Q969T4 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UBE2E3Q969T4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.3■□□□□ 0.36
UBE2E3Q969T4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UBE2E3Q969T4 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UBE2E3Q969T4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBE2E3Q969T4 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBE2E3Q969T4 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.3■□□□□ 0.36
UBE2E3Q969T4 TSPY12P-201ENST00000421279 868 ntBASIC17.3■□□□□ 0.36
UBE2E3Q969T4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.3■□□□□ 0.36
UBE2E3Q969T4 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.3■□□□□ 0.36
UBE2E3Q969T4 AC022616.7-201ENST00000525383 220 ntBASIC17.3■□□□□ 0.36
UBE2E3Q969T4 AC009154.2-201ENST00000621177 724 ntBASIC17.3■□□□□ 0.36
UBE2E3Q969T4 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.3■□□□□ 0.36
UBE2E3Q969T4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.3■□□□□ 0.36
UBE2E3Q969T4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBE2E3Q969T4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.3■□□□□ 0.36
UBE2E3Q969T4 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBE2E3Q969T4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
UBE2E3Q969T4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
UBE2E3Q969T4 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UBE2E3Q969T4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
UBE2E3Q969T4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBE2E3Q969T4 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.3■□□□□ 0.36
UBE2E3Q969T4 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBE2E3Q969T4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBE2E3Q969T4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 IGHGP-201ENST00000390555 1178 ntBASIC17.29■□□□□ 0.36
UBE2E3Q969T4 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 DUX4L26-201ENST00000489078 1255 ntBASIC17.29■□□□□ 0.36
UBE2E3Q969T4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBE2E3Q969T4 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.28■□□□□ 0.36
UBE2E3Q969T4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBE2E3Q969T4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
UBE2E3Q969T4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
UBE2E3Q969T4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.28■□□□□ 0.36
UBE2E3Q969T4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.28■□□□□ 0.36
UBE2E3Q969T4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.28■□□□□ 0.36
UBE2E3Q969T4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBE2E3Q969T4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBE2E3Q969T4 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBE2E3Q969T4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
UBE2E3Q969T4 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.28■□□□□ 0.36
UBE2E3Q969T4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
UBE2E3Q969T4 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.28■□□□□ 0.36
UBE2E3Q969T4 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.28■□□□□ 0.36
UBE2E3Q969T4 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.28■□□□□ 0.36
UBE2E3Q969T4 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.28■□□□□ 0.36
UBE2E3Q969T4 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.28■□□□□ 0.36
UBE2E3Q969T4 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms