Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 BICD1-207ENST00000551848 1962 ntBASIC18.81■□□□□ 0.6
RNF34Q969K3 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF34Q969K3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF34Q969K3 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF34Q969K3 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF34Q969K3 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RNF34Q969K3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF34Q969K3 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF34Q969K3 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF34Q969K3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF34Q969K3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF34Q969K3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF34Q969K3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF34Q969K3 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.8■□□□□ 0.6
RNF34Q969K3 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF34Q969K3 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF34Q969K3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.8■□□□□ 0.6
RNF34Q969K3 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF34Q969K3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RNF34Q969K3 AC093010.1-201ENST00000473625 1624 ntBASIC18.8■□□□□ 0.6
RNF34Q969K3 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RNF34Q969K3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF34Q969K3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF34Q969K3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF34Q969K3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF34Q969K3 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
RNF34Q969K3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF34Q969K3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF34Q969K3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF34Q969K3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF34Q969K3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
RNF34Q969K3 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF34Q969K3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RNF34Q969K3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF34Q969K3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF34Q969K3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF34Q969K3 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF34Q969K3 TSSC2-201ENST00000450217 709 ntBASIC18.79■□□□□ 0.6
RNF34Q969K3 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF34Q969K3 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.79■□□□□ 0.6
RNF34Q969K3 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.79■□□□□ 0.6
RNF34Q969K3 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.79■□□□□ 0.6
RNF34Q969K3 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF34Q969K3 AC135050.7-201ENST00000624508 2218 ntBASIC18.79■□□□□ 0.6
RNF34Q969K3 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF34Q969K3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF34Q969K3 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF34Q969K3 CROCCP1-201ENST00000426910 5675 ntBASIC18.79■□□□□ 0.6
RNF34Q969K3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF34Q969K3 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RNF34Q969K3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF34Q969K3 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF34Q969K3 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
RNF34Q969K3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF34Q969K3 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF34Q969K3 AC016734.2-201ENST00000624325 1377 ntBASIC18.79■□□□□ 0.6
RNF34Q969K3 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF34Q969K3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF34Q969K3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF34Q969K3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF34Q969K3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF34Q969K3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF34Q969K3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF34Q969K3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF34Q969K3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF34Q969K3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF34Q969K3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RNF34Q969K3 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF34Q969K3 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF34Q969K3 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF34Q969K3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF34Q969K3 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
RNF34Q969K3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF34Q969K3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF34Q969K3 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF34Q969K3 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RNF34Q969K3 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.78■□□□□ 0.6
RNF34Q969K3 AC090616.6-201ENST00000582640 721 ntBASIC18.78■□□□□ 0.6
RNF34Q969K3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.78■□□□□ 0.6
RNF34Q969K3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.78■□□□□ 0.6
RNF34Q969K3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RNF34Q969K3 AC124864.1-201ENST00000623408 392 ntBASIC18.78■□□□□ 0.6
RNF34Q969K3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF34Q969K3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
RNF34Q969K3 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.78■□□□□ 0.6
RNF34Q969K3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.78■□□□□ 0.6
RNF34Q969K3 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF34Q969K3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF34Q969K3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF34Q969K3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF34Q969K3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF34Q969K3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF34Q969K3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF34Q969K3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF34Q969K3 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF34Q969K3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF34Q969K3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
RNF34Q969K3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF34Q969K3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF34Q969K3 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms