Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CT55Q8WUE5 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CT55Q8WUE5 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.68■□□□□ 0.26
CT55Q8WUE5 AC073592.3-201ENST00000625118 1834 ntBASIC16.68■□□□□ 0.26
CT55Q8WUE5 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.68■□□□□ 0.26
CT55Q8WUE5 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CT55Q8WUE5 AC022898.2-201ENST00000616822 1312 ntBASIC16.68■□□□□ 0.26
CT55Q8WUE5 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.68■□□□□ 0.26
CT55Q8WUE5 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CT55Q8WUE5 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CT55Q8WUE5 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CT55Q8WUE5 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CT55Q8WUE5 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CT55Q8WUE5 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CT55Q8WUE5 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CT55Q8WUE5 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CT55Q8WUE5 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CT55Q8WUE5 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CT55Q8WUE5 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CT55Q8WUE5 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.67■□□□□ 0.26
CT55Q8WUE5 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CT55Q8WUE5 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CT55Q8WUE5 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CT55Q8WUE5 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.67■□□□□ 0.26
CT55Q8WUE5 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.67■□□□□ 0.26
CT55Q8WUE5 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.67■□□□□ 0.26
CT55Q8WUE5 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
CT55Q8WUE5 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CT55Q8WUE5 PGAM5P1-201ENST00000518923 814 ntBASIC16.67■□□□□ 0.26
CT55Q8WUE5 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
CT55Q8WUE5 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.67■□□□□ 0.26
CT55Q8WUE5 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CT55Q8WUE5 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.67■□□□□ 0.26
CT55Q8WUE5 AL022326.1-202ENST00000641533 845 ntBASIC16.67■□□□□ 0.26
CT55Q8WUE5 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CT55Q8WUE5 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.67■□□□□ 0.26
CT55Q8WUE5 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CT55Q8WUE5 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.67■□□□□ 0.26
CT55Q8WUE5 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CT55Q8WUE5 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CT55Q8WUE5 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CT55Q8WUE5 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CT55Q8WUE5 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.67■□□□□ 0.26
CT55Q8WUE5 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CT55Q8WUE5 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CT55Q8WUE5 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CT55Q8WUE5 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.66■□□□□ 0.26
CT55Q8WUE5 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CT55Q8WUE5 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CT55Q8WUE5 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.66■□□□□ 0.26
CT55Q8WUE5 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CT55Q8WUE5 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.66■□□□□ 0.26
CT55Q8WUE5 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CT55Q8WUE5 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CT55Q8WUE5 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CT55Q8WUE5 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CT55Q8WUE5 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CT55Q8WUE5 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CT55Q8WUE5 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CT55Q8WUE5 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.66■□□□□ 0.26
CT55Q8WUE5 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CT55Q8WUE5 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.66■□□□□ 0.26
CT55Q8WUE5 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.66■□□□□ 0.26
CT55Q8WUE5 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CT55Q8WUE5 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.66■□□□□ 0.26
CT55Q8WUE5 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
CT55Q8WUE5 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CT55Q8WUE5 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
CT55Q8WUE5 FAM197Y3-203ENST00000618346 717 ntBASIC16.66■□□□□ 0.26
CT55Q8WUE5 AD001527.2-201ENST00000622994 785 ntBASIC16.66■□□□□ 0.26
CT55Q8WUE5 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CT55Q8WUE5 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CT55Q8WUE5 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CT55Q8WUE5 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CT55Q8WUE5 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CT55Q8WUE5 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CT55Q8WUE5 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CT55Q8WUE5 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CT55Q8WUE5 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
CT55Q8WUE5 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CT55Q8WUE5 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CT55Q8WUE5 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CT55Q8WUE5 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CT55Q8WUE5 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CT55Q8WUE5 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CT55Q8WUE5 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CT55Q8WUE5 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CT55Q8WUE5 DUTP2-201ENST00000519164 463 ntBASIC16.65■□□□□ 0.26
CT55Q8WUE5 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.65■□□□□ 0.26
CT55Q8WUE5 UNC93B6-202ENST00000528242 690 ntBASIC16.65■□□□□ 0.26
CT55Q8WUE5 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.65■□□□□ 0.26
CT55Q8WUE5 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.65■□□□□ 0.26
CT55Q8WUE5 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.65■□□□□ 0.26
CT55Q8WUE5 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CT55Q8WUE5 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CT55Q8WUE5 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CT55Q8WUE5 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CT55Q8WUE5 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CT55Q8WUE5 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CT55Q8WUE5 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms