Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 CA12-203ENST00000422263 2556 ntTSL 2 BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 AP000593.1-201ENST00000393668 712 ntBASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 SERPINH1P1-201ENST00000419794 1249 ntBASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 AC011767.1-201ENST00000617410 1153 ntBASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 PARP1-210ENST00000629232 477 ntTSL 5 BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 LINC02199-201ENST00000506655 2702 ntBASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMIM11BQ8TCY0 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 CES3-203ENST00000543856 3178 ntTSL 2 BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 HSCB-202ENST00000398941 955 ntTSL 2 BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 AC007322.1-201ENST00000426983 750 ntBASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 POU5F1P3-201ENST00000428824 1078 ntBASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 AL139246.5-201ENST00000606645 996 ntBASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 AL121829.2-201ENST00000620908 328 ntBASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 AC231657.2-201ENST00000624556 255 ntBASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 AGK-211ENST00000629555 2765 ntTSL 5 BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC11.68□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms