Protein–RNA interactions for Protein: Q8TC41

RNF217, Probable E3 ubiquitin-protein ligase RNF217, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF217Q8TC41 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF217Q8TC41 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF217Q8TC41 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF217Q8TC41 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF217Q8TC41 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF217Q8TC41 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF217Q8TC41 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.35■□□□□ 0.37
RNF217Q8TC41 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF217Q8TC41 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.35■□□□□ 0.37
RNF217Q8TC41 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF217Q8TC41 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF217Q8TC41 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF217Q8TC41 HTR7P1-201ENST00000538670 1336 ntBASIC17.35■□□□□ 0.37
RNF217Q8TC41 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.35■□□□□ 0.37
RNF217Q8TC41 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF217Q8TC41 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF217Q8TC41 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.35■□□□□ 0.37
RNF217Q8TC41 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF217Q8TC41 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF217Q8TC41 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
RNF217Q8TC41 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF217Q8TC41 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF217Q8TC41 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF217Q8TC41 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RNF217Q8TC41 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF217Q8TC41 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF217Q8TC41 LINC00896-202ENST00000609602 2128 ntBASIC17.35■□□□□ 0.37
RNF217Q8TC41 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF217Q8TC41 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF217Q8TC41 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF217Q8TC41 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF217Q8TC41 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF217Q8TC41 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF217Q8TC41 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF217Q8TC41 PKD1P5-201ENST00000532415 10291 ntBASIC17.34■□□□□ 0.37
RNF217Q8TC41 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF217Q8TC41 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF217Q8TC41 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF217Q8TC41 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF217Q8TC41 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF217Q8TC41 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
RNF217Q8TC41 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF217Q8TC41 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF217Q8TC41 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF217Q8TC41 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF217Q8TC41 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF217Q8TC41 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF217Q8TC41 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF217Q8TC41 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF217Q8TC41 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF217Q8TC41 FAM201B-201ENST00000458407 597 ntBASIC17.34■□□□□ 0.37
RNF217Q8TC41 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF217Q8TC41 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF217Q8TC41 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.34■□□□□ 0.37
RNF217Q8TC41 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF217Q8TC41 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF217Q8TC41 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF217Q8TC41 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.34■□□□□ 0.37
RNF217Q8TC41 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF217Q8TC41 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF217Q8TC41 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF217Q8TC41 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF217Q8TC41 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RNF217Q8TC41 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
RNF217Q8TC41 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF217Q8TC41 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.33■□□□□ 0.37
RNF217Q8TC41 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
RNF217Q8TC41 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF217Q8TC41 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF217Q8TC41 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
RNF217Q8TC41 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
RNF217Q8TC41 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RNF217Q8TC41 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF217Q8TC41 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RNF217Q8TC41 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF217Q8TC41 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.36
RNF217Q8TC41 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF217Q8TC41 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF217Q8TC41 POU5F1P3-201ENST00000428824 1078 ntBASIC17.33■□□□□ 0.36
RNF217Q8TC41 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF217Q8TC41 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF217Q8TC41 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF217Q8TC41 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RNF217Q8TC41 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF217Q8TC41 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF217Q8TC41 AL031598.1-201ENST00000561511 1773 ntBASIC17.33■□□□□ 0.36
RNF217Q8TC41 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF217Q8TC41 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF217Q8TC41 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF217Q8TC41 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF217Q8TC41 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF217Q8TC41 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF217Q8TC41 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RNF217Q8TC41 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF217Q8TC41 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
RNF217Q8TC41 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF217Q8TC41 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF217Q8TC41 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF217Q8TC41 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF217Q8TC41 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms