Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.39■□□□□ 0.21
CLDN22Q8N7P3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN22Q8N7P3 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN22Q8N7P3 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN22Q8N7P3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
CLDN22Q8N7P3 AL138688.1-201ENST00000624851 1594 ntBASIC16.38■□□□□ 0.21
CLDN22Q8N7P3 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN22Q8N7P3 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.38■□□□□ 0.21
CLDN22Q8N7P3 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
CLDN22Q8N7P3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.38■□□□□ 0.21
CLDN22Q8N7P3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN22Q8N7P3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN22Q8N7P3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CLDN22Q8N7P3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN22Q8N7P3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN22Q8N7P3 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
CLDN22Q8N7P3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN22Q8N7P3 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.38■□□□□ 0.21
CLDN22Q8N7P3 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.38■□□□□ 0.21
CLDN22Q8N7P3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN22Q8N7P3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN22Q8N7P3 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN22Q8N7P3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN22Q8N7P3 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN22Q8N7P3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CLDN22Q8N7P3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN22Q8N7P3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.38■□□□□ 0.21
CLDN22Q8N7P3 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN22Q8N7P3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CLDN22Q8N7P3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN22Q8N7P3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
CLDN22Q8N7P3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN22Q8N7P3 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN22Q8N7P3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN22Q8N7P3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN22Q8N7P3 AL023806.1-201ENST00000603994 1649 ntBASIC16.37■□□□□ 0.21
CLDN22Q8N7P3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN22Q8N7P3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CLDN22Q8N7P3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN22Q8N7P3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN22Q8N7P3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN22Q8N7P3 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN22Q8N7P3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN22Q8N7P3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN22Q8N7P3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN22Q8N7P3 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.37■□□□□ 0.21
CLDN22Q8N7P3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN22Q8N7P3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CLDN22Q8N7P3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN22Q8N7P3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
CLDN22Q8N7P3 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN22Q8N7P3 ECEL1P2-202ENST00000465689 757 ntBASIC16.37■□□□□ 0.21
CLDN22Q8N7P3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CLDN22Q8N7P3 AC008687.5-201ENST00000593746 558 ntBASIC16.37■□□□□ 0.21
CLDN22Q8N7P3 AC066615.1-201ENST00000640911 628 ntBASIC16.37■□□□□ 0.21
CLDN22Q8N7P3 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN22Q8N7P3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN22Q8N7P3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN22Q8N7P3 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.37■□□□□ 0.21
CLDN22Q8N7P3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.37■□□□□ 0.21
CLDN22Q8N7P3 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN22Q8N7P3 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN22Q8N7P3 AC133963.1-201ENST00000504166 1679 ntBASIC16.37■□□□□ 0.21
CLDN22Q8N7P3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CLDN22Q8N7P3 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN22Q8N7P3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.36■□□□□ 0.21
CLDN22Q8N7P3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN22Q8N7P3 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.36■□□□□ 0.21
CLDN22Q8N7P3 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.36■□□□□ 0.21
CLDN22Q8N7P3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN22Q8N7P3 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN22Q8N7P3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN22Q8N7P3 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN22Q8N7P3 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.36■□□□□ 0.21
CLDN22Q8N7P3 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN22Q8N7P3 MMP23A-201ENST00000234610 1017 ntBASIC16.36■□□□□ 0.21
CLDN22Q8N7P3 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN22Q8N7P3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CLDN22Q8N7P3 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN22Q8N7P3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.36■□□□□ 0.21
CLDN22Q8N7P3 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN22Q8N7P3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.36■□□□□ 0.21
CLDN22Q8N7P3 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.36■□□□□ 0.21
CLDN22Q8N7P3 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.36■□□□□ 0.21
CLDN22Q8N7P3 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN22Q8N7P3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN22Q8N7P3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN22Q8N7P3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.36■□□□□ 0.21
CLDN22Q8N7P3 EGLN1P1-201ENST00000531623 762 ntBASIC16.36■□□□□ 0.21
CLDN22Q8N7P3 NAPSB-206ENST00000562112 1266 ntBASIC16.36■□□□□ 0.21
CLDN22Q8N7P3 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.36■□□□□ 0.21
CLDN22Q8N7P3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN22Q8N7P3 AC010240.3-201ENST00000607688 395 ntBASIC16.36■□□□□ 0.21
CLDN22Q8N7P3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.36■□□□□ 0.21
CLDN22Q8N7P3 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CLDN22Q8N7P3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN22Q8N7P3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.36■□□□□ 0.21
CLDN22Q8N7P3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.36■□□□□ 0.21
CLDN22Q8N7P3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN22Q8N7P3 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms