Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CCDC33Q8N5R6 TPSP2-201ENST00000561760 610 ntBASIC18.87■□□□□ 0.61
CCDC33Q8N5R6 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CCDC33Q8N5R6 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC33Q8N5R6 IFNL4P1-201ENST00000607083 540 ntBASIC18.87■□□□□ 0.61
CCDC33Q8N5R6 AL732292.2-201ENST00000609649 430 ntBASIC18.87■□□□□ 0.61
CCDC33Q8N5R6 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC33Q8N5R6 LINC01126-201ENST00000623515 1646 ntBASIC18.87■□□□□ 0.61
CCDC33Q8N5R6 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC33Q8N5R6 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC33Q8N5R6 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC33Q8N5R6 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC33Q8N5R6 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CCDC33Q8N5R6 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC33Q8N5R6 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC33Q8N5R6 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC33Q8N5R6 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CCDC33Q8N5R6 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC33Q8N5R6 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC33Q8N5R6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC33Q8N5R6 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC33Q8N5R6 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC33Q8N5R6 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC33Q8N5R6 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC33Q8N5R6 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC33Q8N5R6 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC33Q8N5R6 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.86■□□□□ 0.61
CCDC33Q8N5R6 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC33Q8N5R6 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CCDC33Q8N5R6 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC33Q8N5R6 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.86■□□□□ 0.61
CCDC33Q8N5R6 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CCDC33Q8N5R6 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC33Q8N5R6 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CCDC33Q8N5R6 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.86■□□□□ 0.61
CCDC33Q8N5R6 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC33Q8N5R6 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CCDC33Q8N5R6 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC33Q8N5R6 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC33Q8N5R6 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC33Q8N5R6 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC33Q8N5R6 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC33Q8N5R6 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CCDC33Q8N5R6 PHGDH-209ENST00000641074 1780 ntBASIC18.86■□□□□ 0.61
CCDC33Q8N5R6 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC33Q8N5R6 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC33Q8N5R6 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC33Q8N5R6 GMCL1P1-201ENST00000463439 1581 ntBASIC18.85■□□□□ 0.61
CCDC33Q8N5R6 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC33Q8N5R6 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC33Q8N5R6 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC33Q8N5R6 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CCDC33Q8N5R6 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CCDC33Q8N5R6 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC33Q8N5R6 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC33Q8N5R6 KRT8P7-201ENST00000533003 1432 ntBASIC18.85■□□□□ 0.61
CCDC33Q8N5R6 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC33Q8N5R6 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC33Q8N5R6 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC33Q8N5R6 MIR149-201ENST00000384879 89 ntBASIC18.85■□□□□ 0.61
CCDC33Q8N5R6 FDX1P1-201ENST00000449115 551 ntBASIC18.85■□□□□ 0.61
CCDC33Q8N5R6 TOB2P1-201ENST00000469761 992 ntBASIC18.85■□□□□ 0.61
CCDC33Q8N5R6 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC33Q8N5R6 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC33Q8N5R6 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC33Q8N5R6 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC33Q8N5R6 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.85■□□□□ 0.61
CCDC33Q8N5R6 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC33Q8N5R6 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC33Q8N5R6 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC33Q8N5R6 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC33Q8N5R6 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC33Q8N5R6 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CCDC33Q8N5R6 NOC2LP1-202ENST00000452600 2235 ntBASIC18.85■□□□□ 0.61
CCDC33Q8N5R6 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC33Q8N5R6 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC33Q8N5R6 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC33Q8N5R6 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CCDC33Q8N5R6 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC33Q8N5R6 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC33Q8N5R6 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC33Q8N5R6 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC33Q8N5R6 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CCDC33Q8N5R6 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC33Q8N5R6 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC33Q8N5R6 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CCDC33Q8N5R6 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CCDC33Q8N5R6 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC33Q8N5R6 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC33Q8N5R6 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC33Q8N5R6 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC33Q8N5R6 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC33Q8N5R6 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC33Q8N5R6 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC33Q8N5R6 DRAXINP1-201ENST00000437611 948 ntBASIC18.84■□□□□ 0.61
CCDC33Q8N5R6 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC33Q8N5R6 AP003733.1-201ENST00000491725 852 ntBASIC18.84■□□□□ 0.61
CCDC33Q8N5R6 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.84■□□□□ 0.61
CCDC33Q8N5R6 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC33Q8N5R6 AC005332.3-201ENST00000589904 676 ntBASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms