Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
HIST3H2BBQ8N257 MIR4508-201ENST00000584178 70 ntBASIC13.4□□□□□ -0.26
HIST3H2BBQ8N257 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC13.4□□□□□ -0.26
HIST3H2BBQ8N257 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.4□□□□□ -0.26
HIST3H2BBQ8N257 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST3H2BBQ8N257 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST3H2BBQ8N257 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.4□□□□□ -0.26
HIST3H2BBQ8N257 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST3H2BBQ8N257 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST3H2BBQ8N257 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST3H2BBQ8N257 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST3H2BBQ8N257 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST3H2BBQ8N257 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
HIST3H2BBQ8N257 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST3H2BBQ8N257 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
HIST3H2BBQ8N257 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
HIST3H2BBQ8N257 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST3H2BBQ8N257 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.39□□□□□ -0.27
HIST3H2BBQ8N257 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.39□□□□□ -0.27
HIST3H2BBQ8N257 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.39□□□□□ -0.27
HIST3H2BBQ8N257 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST3H2BBQ8N257 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC13.39□□□□□ -0.27
HIST3H2BBQ8N257 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
HIST3H2BBQ8N257 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.39□□□□□ -0.27
HIST3H2BBQ8N257 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC13.39□□□□□ -0.27
HIST3H2BBQ8N257 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
HIST3H2BBQ8N257 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.39□□□□□ -0.27
HIST3H2BBQ8N257 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
HIST3H2BBQ8N257 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.39□□□□□ -0.27
HIST3H2BBQ8N257 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
HIST3H2BBQ8N257 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC13.39□□□□□ -0.27
HIST3H2BBQ8N257 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC13.39□□□□□ -0.27
HIST3H2BBQ8N257 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC13.39□□□□□ -0.27
HIST3H2BBQ8N257 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC13.39□□□□□ -0.27
HIST3H2BBQ8N257 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HIST3H2BBQ8N257 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
HIST3H2BBQ8N257 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST3H2BBQ8N257 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
HIST3H2BBQ8N257 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST3H2BBQ8N257 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST3H2BBQ8N257 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
HIST3H2BBQ8N257 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST3H2BBQ8N257 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
HIST3H2BBQ8N257 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
HIST3H2BBQ8N257 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
HIST3H2BBQ8N257 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST3H2BBQ8N257 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
HIST3H2BBQ8N257 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST3H2BBQ8N257 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST3H2BBQ8N257 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HIST3H2BBQ8N257 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST3H2BBQ8N257 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HIST3H2BBQ8N257 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HIST3H2BBQ8N257 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST3H2BBQ8N257 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST3H2BBQ8N257 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
HIST3H2BBQ8N257 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HIST3H2BBQ8N257 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC13.39□□□□□ -0.27
HIST3H2BBQ8N257 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
HIST3H2BBQ8N257 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.38□□□□□ -0.27
HIST3H2BBQ8N257 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
HIST3H2BBQ8N257 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2BBQ8N257 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.38□□□□□ -0.27
HIST3H2BBQ8N257 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
HIST3H2BBQ8N257 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2BBQ8N257 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
HIST3H2BBQ8N257 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.38□□□□□ -0.27
HIST3H2BBQ8N257 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.38□□□□□ -0.27
HIST3H2BBQ8N257 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2BBQ8N257 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2BBQ8N257 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2BBQ8N257 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
HIST3H2BBQ8N257 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2BBQ8N257 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2BBQ8N257 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2BBQ8N257 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2BBQ8N257 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC13.38□□□□□ -0.27
HIST3H2BBQ8N257 AC105265.2-201ENST00000467189 838 ntBASIC13.38□□□□□ -0.27
HIST3H2BBQ8N257 AC133561.4-201ENST00000566112 224 ntBASIC13.38□□□□□ -0.27
HIST3H2BBQ8N257 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2BBQ8N257 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2BBQ8N257 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
HIST3H2BBQ8N257 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2BBQ8N257 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2BBQ8N257 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2BBQ8N257 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2BBQ8N257 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2BBQ8N257 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2BBQ8N257 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2BBQ8N257 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2BBQ8N257 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2BBQ8N257 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2BBQ8N257 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2BBQ8N257 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
HIST3H2BBQ8N257 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2BBQ8N257 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
HIST3H2BBQ8N257 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
HIST3H2BBQ8N257 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2BBQ8N257 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2BBQ8N257 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms