Protein–RNA interactions for Protein: Q8IX21

SLF2, SMC5-SMC6 complex localization factor protein 2, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2Q8IX21 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC21.38■■□□□ 1.01
SLF2Q8IX21 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC21.38■■□□□ 1.01
SLF2Q8IX21 PMS2P1-201ENST00000431037 1228 ntBASIC21.38■■□□□ 1.01
SLF2Q8IX21 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLF2Q8IX21 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC21.38■■□□□ 1.01
SLF2Q8IX21 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC21.38■■□□□ 1.01
SLF2Q8IX21 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
SLF2Q8IX21 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
SLF2Q8IX21 AF228730.7-201ENST00000641842 219 ntBASIC21.38■■□□□ 1.01
SLF2Q8IX21 AC010460.3-201ENST00000511359 1579 ntBASIC21.38■■□□□ 1.01
SLF2Q8IX21 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLF2Q8IX21 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC21.38■■□□□ 1.01
SLF2Q8IX21 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
SLF2Q8IX21 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLF2Q8IX21 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.38■■□□□ 1.01
SLF2Q8IX21 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SLF2Q8IX21 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLF2Q8IX21 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLF2Q8IX21 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC21.38■■□□□ 1.01
SLF2Q8IX21 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC21.38■■□□□ 1.01
SLF2Q8IX21 AL096828.2-201ENST00000567259 1965 ntBASIC21.37■■□□□ 1.01
SLF2Q8IX21 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SLF2Q8IX21 AC018445.3-201ENST00000624177 1945 ntBASIC21.37■■□□□ 1.01
SLF2Q8IX21 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
SLF2Q8IX21 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLF2Q8IX21 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLF2Q8IX21 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SLF2Q8IX21 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
SLF2Q8IX21 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLF2Q8IX21 COX5BP2-201ENST00000392354 334 ntBASIC21.37■■□□□ 1.01
SLF2Q8IX21 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SLF2Q8IX21 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC21.37■■□□□ 1.01
SLF2Q8IX21 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
SLF2Q8IX21 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLF2Q8IX21 HNRNPDP1-201ENST00000439535 754 ntBASIC21.37■■□□□ 1.01
SLF2Q8IX21 PON3-205ENST00000451904 1053 ntTSL 3 BASIC21.37■■□□□ 1.01
SLF2Q8IX21 MSRA-206ENST00000521209 814 ntTSL 3 BASIC21.37■■□□□ 1.01
SLF2Q8IX21 OR7E14P-202ENST00000530490 1290 ntBASIC21.37■■□□□ 1.01
SLF2Q8IX21 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SLF2Q8IX21 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC21.37■■□□□ 1.01
SLF2Q8IX21 PNMT-203ENST00000581428 677 ntTSL 2 BASIC21.37■■□□□ 1.01
SLF2Q8IX21 AC116407.2-201ENST00000613639 860 ntBASIC21.37■■□□□ 1.01
SLF2Q8IX21 MIR7706-201ENST00000613747 67 ntBASIC21.37■■□□□ 1.01
SLF2Q8IX21 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC21.37■■□□□ 1.01
SLF2Q8IX21 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC21.37■■□□□ 1.01
SLF2Q8IX21 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC21.37■■□□□ 1.01
SLF2Q8IX21 WIZP1-201ENST00000531444 2299 ntBASIC21.37■■□□□ 1.01
SLF2Q8IX21 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.37■■□□□ 1.01
SLF2Q8IX21 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SLF2Q8IX21 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLF2Q8IX21 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLF2Q8IX21 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.37■■□□□ 1.01
SLF2Q8IX21 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLF2Q8IX21 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
SLF2Q8IX21 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLF2Q8IX21 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.37■■□□□ 1.01
SLF2Q8IX21 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLF2Q8IX21 AC243591.1-201ENST00000452967 1364 ntBASIC21.36■■□□□ 1.01
SLF2Q8IX21 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
SLF2Q8IX21 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLF2Q8IX21 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLF2Q8IX21 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SLF2Q8IX21 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLF2Q8IX21 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SLF2Q8IX21 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC21.36■■□□□ 1.01
SLF2Q8IX21 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SLF2Q8IX21 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
SLF2Q8IX21 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC21.36■■□□□ 1.01
SLF2Q8IX21 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC21.36■■□□□ 1.01
SLF2Q8IX21 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC21.36■■□□□ 1.01
SLF2Q8IX21 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SLF2Q8IX21 NKAPP1-205ENST00000585790 367 ntBASIC21.36■■□□□ 1.01
SLF2Q8IX21 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.36■■□□□ 1.01
SLF2Q8IX21 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
SLF2Q8IX21 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLF2Q8IX21 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.36■■□□□ 1.01
SLF2Q8IX21 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC21.36■■□□□ 1.01
SLF2Q8IX21 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.36■■□□□ 1.01
SLF2Q8IX21 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SLF2Q8IX21 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLF2Q8IX21 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLF2Q8IX21 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLF2Q8IX21 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC21.35■■□□□ 1.01
SLF2Q8IX21 RPS2P1-201ENST00000434010 821 ntBASIC21.35■■□□□ 1.01
SLF2Q8IX21 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SLF2Q8IX21 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC21.35■■□□□ 1.01
SLF2Q8IX21 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC21.35■■□□□ 1.01
SLF2Q8IX21 AD001527.2-201ENST00000622994 785 ntBASIC21.35■■□□□ 1.01
SLF2Q8IX21 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC21.35■■□□□ 1.01
SLF2Q8IX21 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLF2Q8IX21 HLA-J-201ENST00000462773 1622 ntBASIC21.35■■□□□ 1.01
SLF2Q8IX21 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
SLF2Q8IX21 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLF2Q8IX21 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC21.35■■□□□ 1.01
SLF2Q8IX21 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLF2Q8IX21 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLF2Q8IX21 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLF2Q8IX21 PMPCAP1-201ENST00000508114 1576 ntBASIC21.35■■□□□ 1.01
SLF2Q8IX21 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.35■■□□□ 1.01
SLF2Q8IX21 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms