Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RFWD3Q6PCD5 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RFWD3Q6PCD5 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RFWD3Q6PCD5 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFWD3Q6PCD5 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RFWD3Q6PCD5 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RFWD3Q6PCD5 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RFWD3Q6PCD5 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFWD3Q6PCD5 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.72■□□□□ 0.59
RFWD3Q6PCD5 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFWD3Q6PCD5 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RFWD3Q6PCD5 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFWD3Q6PCD5 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RFWD3Q6PCD5 DRAXINP1-201ENST00000437611 948 ntBASIC18.72■□□□□ 0.59
RFWD3Q6PCD5 DUSP5P1-201ENST00000441325 1139 ntBASIC18.72■□□□□ 0.59
RFWD3Q6PCD5 RN7SL606P-201ENST00000472779 293 ntBASIC18.72■□□□□ 0.59
RFWD3Q6PCD5 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.72■□□□□ 0.59
RFWD3Q6PCD5 AP000867.3-201ENST00000524675 377 ntBASIC18.72■□□□□ 0.59
RFWD3Q6PCD5 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
RFWD3Q6PCD5 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RFWD3Q6PCD5 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFWD3Q6PCD5 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFWD3Q6PCD5 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.72■□□□□ 0.59
RFWD3Q6PCD5 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RFWD3Q6PCD5 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RFWD3Q6PCD5 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFWD3Q6PCD5 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.72■□□□□ 0.59
RFWD3Q6PCD5 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
RFWD3Q6PCD5 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RFWD3Q6PCD5 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.71■□□□□ 0.59
RFWD3Q6PCD5 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.71■□□□□ 0.59
RFWD3Q6PCD5 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.71■□□□□ 0.59
RFWD3Q6PCD5 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFWD3Q6PCD5 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
RFWD3Q6PCD5 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RFWD3Q6PCD5 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.71■□□□□ 0.59
RFWD3Q6PCD5 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
RFWD3Q6PCD5 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFWD3Q6PCD5 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RFWD3Q6PCD5 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
RFWD3Q6PCD5 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
RFWD3Q6PCD5 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.71■□□□□ 0.59
RFWD3Q6PCD5 MIR3652-201ENST00000579335 131 ntBASIC18.71■□□□□ 0.59
RFWD3Q6PCD5 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.71■□□□□ 0.59
RFWD3Q6PCD5 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFWD3Q6PCD5 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.71■□□□□ 0.59
RFWD3Q6PCD5 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFWD3Q6PCD5 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFWD3Q6PCD5 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RFWD3Q6PCD5 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFWD3Q6PCD5 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RFWD3Q6PCD5 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFWD3Q6PCD5 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RFWD3Q6PCD5 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.71■□□□□ 0.59
RFWD3Q6PCD5 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.71■□□□□ 0.59
RFWD3Q6PCD5 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFWD3Q6PCD5 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFWD3Q6PCD5 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFWD3Q6PCD5 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
RFWD3Q6PCD5 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.7■□□□□ 0.58
RFWD3Q6PCD5 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFWD3Q6PCD5 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFWD3Q6PCD5 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.7■□□□□ 0.58
RFWD3Q6PCD5 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFWD3Q6PCD5 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFWD3Q6PCD5 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFWD3Q6PCD5 TSPY12P-201ENST00000421279 868 ntBASIC18.7■□□□□ 0.58
RFWD3Q6PCD5 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFWD3Q6PCD5 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFWD3Q6PCD5 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFWD3Q6PCD5 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.7■□□□□ 0.58
RFWD3Q6PCD5 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFWD3Q6PCD5 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.7■□□□□ 0.58
RFWD3Q6PCD5 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.7■□□□□ 0.58
RFWD3Q6PCD5 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFWD3Q6PCD5 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RFWD3Q6PCD5 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFWD3Q6PCD5 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.7■□□□□ 0.58
RFWD3Q6PCD5 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.7■□□□□ 0.58
RFWD3Q6PCD5 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFWD3Q6PCD5 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFWD3Q6PCD5 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFWD3Q6PCD5 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFWD3Q6PCD5 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFWD3Q6PCD5 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.7■□□□□ 0.58
RFWD3Q6PCD5 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
RFWD3Q6PCD5 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFWD3Q6PCD5 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.7■□□□□ 0.58
RFWD3Q6PCD5 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFWD3Q6PCD5 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RFWD3Q6PCD5 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.7■□□□□ 0.58
RFWD3Q6PCD5 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
RFWD3Q6PCD5 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFWD3Q6PCD5 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.69■□□□□ 0.58
RFWD3Q6PCD5 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.69■□□□□ 0.58
RFWD3Q6PCD5 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFWD3Q6PCD5 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RFWD3Q6PCD5 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RFWD3Q6PCD5 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RFWD3Q6PCD5 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms