Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 REXO1L3P-201ENST00000622202 1288 ntBASIC18.4■□□□□ 0.54
PTCRAQ6ISU1 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PTCRAQ6ISU1 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.4■□□□□ 0.54
PTCRAQ6ISU1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.4■□□□□ 0.54
PTCRAQ6ISU1 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PTCRAQ6ISU1 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
PTCRAQ6ISU1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTCRAQ6ISU1 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
PTCRAQ6ISU1 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
PTCRAQ6ISU1 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PTCRAQ6ISU1 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTCRAQ6ISU1 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PTCRAQ6ISU1 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.39■□□□□ 0.53
PTCRAQ6ISU1 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTCRAQ6ISU1 GAPDHP21-201ENST00000450301 1010 ntBASIC18.39■□□□□ 0.53
PTCRAQ6ISU1 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTCRAQ6ISU1 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.39■□□□□ 0.53
PTCRAQ6ISU1 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.39■□□□□ 0.53
PTCRAQ6ISU1 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.39■□□□□ 0.53
PTCRAQ6ISU1 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.39■□□□□ 0.53
PTCRAQ6ISU1 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.39■□□□□ 0.53
PTCRAQ6ISU1 DUX4L17-201ENST00000557360 1267 ntBASIC18.39■□□□□ 0.53
PTCRAQ6ISU1 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.39■□□□□ 0.53
PTCRAQ6ISU1 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTCRAQ6ISU1 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTCRAQ6ISU1 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.39■□□□□ 0.53
PTCRAQ6ISU1 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTCRAQ6ISU1 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.39■□□□□ 0.53
PTCRAQ6ISU1 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.39■□□□□ 0.53
PTCRAQ6ISU1 AL805961.1-202ENST00000641562 540 ntBASIC18.39■□□□□ 0.53
PTCRAQ6ISU1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTCRAQ6ISU1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.39■□□□□ 0.53
PTCRAQ6ISU1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.39■□□□□ 0.53
PTCRAQ6ISU1 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTCRAQ6ISU1 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.39■□□□□ 0.53
PTCRAQ6ISU1 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTCRAQ6ISU1 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PTCRAQ6ISU1 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTCRAQ6ISU1 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTCRAQ6ISU1 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTCRAQ6ISU1 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.38■□□□□ 0.53
PTCRAQ6ISU1 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTCRAQ6ISU1 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.38■□□□□ 0.53
PTCRAQ6ISU1 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTCRAQ6ISU1 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PTCRAQ6ISU1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTCRAQ6ISU1 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
PTCRAQ6ISU1 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTCRAQ6ISU1 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.38■□□□□ 0.53
PTCRAQ6ISU1 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTCRAQ6ISU1 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.38■□□□□ 0.53
PTCRAQ6ISU1 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTCRAQ6ISU1 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTCRAQ6ISU1 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTCRAQ6ISU1 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.38■□□□□ 0.53
PTCRAQ6ISU1 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PTCRAQ6ISU1 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
PTCRAQ6ISU1 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTCRAQ6ISU1 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.38■□□□□ 0.53
PTCRAQ6ISU1 AC002472.2-201ENST00000442739 958 ntBASIC18.38■□□□□ 0.53
PTCRAQ6ISU1 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTCRAQ6ISU1 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.38■□□□□ 0.53
PTCRAQ6ISU1 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.38■□□□□ 0.53
PTCRAQ6ISU1 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.38■□□□□ 0.53
PTCRAQ6ISU1 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTCRAQ6ISU1 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.38■□□□□ 0.53
PTCRAQ6ISU1 AC015911.4-201ENST00000588022 1070 ntBASIC18.38■□□□□ 0.53
PTCRAQ6ISU1 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.38■□□□□ 0.53
PTCRAQ6ISU1 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.38■□□□□ 0.53
PTCRAQ6ISU1 AL008721.1-201ENST00000609964 604 ntBASIC18.38■□□□□ 0.53
PTCRAQ6ISU1 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PTCRAQ6ISU1 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTCRAQ6ISU1 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTCRAQ6ISU1 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTCRAQ6ISU1 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTCRAQ6ISU1 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.38■□□□□ 0.53
PTCRAQ6ISU1 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTCRAQ6ISU1 AL121761.2-201ENST00000598007 1648 ntBASIC18.38■□□□□ 0.53
PTCRAQ6ISU1 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
PTCRAQ6ISU1 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTCRAQ6ISU1 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTCRAQ6ISU1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.37■□□□□ 0.53
PTCRAQ6ISU1 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.37■□□□□ 0.53
PTCRAQ6ISU1 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PTCRAQ6ISU1 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTCRAQ6ISU1 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PTCRAQ6ISU1 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.37■□□□□ 0.53
PTCRAQ6ISU1 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PTCRAQ6ISU1 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PTCRAQ6ISU1 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.37■□□□□ 0.53
PTCRAQ6ISU1 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.37■□□□□ 0.53
PTCRAQ6ISU1 DDX43P3-201ENST00000441064 443 ntBASIC18.37■□□□□ 0.53
PTCRAQ6ISU1 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.37■□□□□ 0.53
PTCRAQ6ISU1 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PTCRAQ6ISU1 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.37■□□□□ 0.53
PTCRAQ6ISU1 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.37■□□□□ 0.53
PTCRAQ6ISU1 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.37■□□□□ 0.53
PTCRAQ6ISU1 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.37■□□□□ 0.53
PTCRAQ6ISU1 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTCRAQ6ISU1 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms