Protein–RNA interactions for Protein: P52657

GTF2A2, Transcription initiation factor IIA subunit 2, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2P52657 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
GTF2A2P52657 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
GTF2A2P52657 NCF1C-201ENST00000438382 1427 ntBASIC20.61■□□□□ 0.89
GTF2A2P52657 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.61■□□□□ 0.89
GTF2A2P52657 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.6■□□□□ 0.89
GTF2A2P52657 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
GTF2A2P52657 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.6■□□□□ 0.89
GTF2A2P52657 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
GTF2A2P52657 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
GTF2A2P52657 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GTF2A2P52657 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GTF2A2P52657 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
GTF2A2P52657 COX5BP2-201ENST00000392354 334 ntBASIC20.6■□□□□ 0.89
GTF2A2P52657 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC20.6■□□□□ 0.89
GTF2A2P52657 RPS15P9-201ENST00000494093 319 ntBASIC20.6■□□□□ 0.89
GTF2A2P52657 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC20.6■□□□□ 0.89
GTF2A2P52657 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.6■□□□□ 0.89
GTF2A2P52657 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.6■□□□□ 0.89
GTF2A2P52657 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.6■□□□□ 0.89
GTF2A2P52657 AC106028.4-201ENST00000614509 607 ntBASIC20.6■□□□□ 0.89
GTF2A2P52657 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC20.6■□□□□ 0.89
GTF2A2P52657 AC004790.2-201ENST00000623588 572 ntBASIC20.6■□□□□ 0.89
GTF2A2P52657 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.6■□□□□ 0.89
GTF2A2P52657 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.6■□□□□ 0.89
GTF2A2P52657 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
GTF2A2P52657 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
GTF2A2P52657 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GTF2A2P52657 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GTF2A2P52657 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.6■□□□□ 0.89
GTF2A2P52657 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GTF2A2P52657 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GTF2A2P52657 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
GTF2A2P52657 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.6■□□□□ 0.89
GTF2A2P52657 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GTF2A2P52657 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.59■□□□□ 0.89
GTF2A2P52657 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GTF2A2P52657 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GTF2A2P52657 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
GTF2A2P52657 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.59■□□□□ 0.89
GTF2A2P52657 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GTF2A2P52657 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.59■□□□□ 0.89
GTF2A2P52657 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GTF2A2P52657 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GTF2A2P52657 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.59■□□□□ 0.89
GTF2A2P52657 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.59■□□□□ 0.89
GTF2A2P52657 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.59■□□□□ 0.89
GTF2A2P52657 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC20.59■□□□□ 0.89
GTF2A2P52657 CCND1-203ENST00000536559 553 ntTSL 3 BASIC20.59■□□□□ 0.89
GTF2A2P52657 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GTF2A2P52657 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC20.59■□□□□ 0.89
GTF2A2P52657 AC011467.4-201ENST00000594891 528 ntBASIC20.59■□□□□ 0.89
GTF2A2P52657 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
GTF2A2P52657 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GTF2A2P52657 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
GTF2A2P52657 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GTF2A2P52657 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.59■□□□□ 0.89
GTF2A2P52657 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GTF2A2P52657 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
GTF2A2P52657 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.59■□□□□ 0.89
GTF2A2P52657 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
GTF2A2P52657 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GTF2A2P52657 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GTF2A2P52657 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
GTF2A2P52657 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.58■□□□□ 0.89
GTF2A2P52657 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
GTF2A2P52657 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
GTF2A2P52657 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC20.58■□□□□ 0.89
GTF2A2P52657 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GTF2A2P52657 CFL1-212ENST00000531413 636 ntTSL 3 BASIC20.58■□□□□ 0.89
GTF2A2P52657 CD63-210ENST00000550776 870 ntTSL 5 BASIC20.58■□□□□ 0.89
GTF2A2P52657 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.58■□□□□ 0.89
GTF2A2P52657 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC20.58■□□□□ 0.89
GTF2A2P52657 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.58■□□□□ 0.89
GTF2A2P52657 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC20.58■□□□□ 0.89
GTF2A2P52657 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
GTF2A2P52657 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
GTF2A2P52657 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
GTF2A2P52657 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.58■□□□□ 0.88
GTF2A2P52657 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.58■□□□□ 0.88
GTF2A2P52657 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
GTF2A2P52657 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GTF2A2P52657 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.57■□□□□ 0.88
GTF2A2P52657 AFG3L1P-217ENST00000557444 2447 ntBASIC20.57■□□□□ 0.88
GTF2A2P52657 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
GTF2A2P52657 AL353593.2-201ENST00000602529 1483 ntBASIC20.57■□□□□ 0.88
GTF2A2P52657 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.57■□□□□ 0.88
GTF2A2P52657 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GTF2A2P52657 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
GTF2A2P52657 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GTF2A2P52657 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
GTF2A2P52657 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GTF2A2P52657 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC20.57■□□□□ 0.88
GTF2A2P52657 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.57■□□□□ 0.88
GTF2A2P52657 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
GTF2A2P52657 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.57■□□□□ 0.88
GTF2A2P52657 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.57■□□□□ 0.88
GTF2A2P52657 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.57■□□□□ 0.88
GTF2A2P52657 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
GTF2A2P52657 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
GTF2A2P52657 AC005082.1-201ENST00000413042 2259 ntBASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms