Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC018712.1-201ENST00000455767 687 ntBASIC19.07■□□□□ 0.64
BRCC3P46736 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
BRCC3P46736 AF186996.4-201ENST00000467186 377 ntBASIC19.07■□□□□ 0.64
BRCC3P46736 RNPS1P1-201ENST00000507437 918 ntBASIC19.07■□□□□ 0.64
BRCC3P46736 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
BRCC3P46736 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.07■□□□□ 0.64
BRCC3P46736 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.07■□□□□ 0.64
BRCC3P46736 AL049840.3-201ENST00000602669 611 ntBASIC19.07■□□□□ 0.64
BRCC3P46736 AC064862.7-201ENST00000604520 867 ntBASIC19.07■□□□□ 0.64
BRCC3P46736 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BRCC3P46736 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.07■□□□□ 0.64
BRCC3P46736 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BRCC3P46736 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BRCC3P46736 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.07■□□□□ 0.64
BRCC3P46736 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BRCC3P46736 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
BRCC3P46736 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BRCC3P46736 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
BRCC3P46736 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.07■□□□□ 0.64
BRCC3P46736 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BRCC3P46736 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
BRCC3P46736 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.07■□□□□ 0.64
BRCC3P46736 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
BRCC3P46736 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BRCC3P46736 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.06■□□□□ 0.64
BRCC3P46736 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
BRCC3P46736 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.06■□□□□ 0.64
BRCC3P46736 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
BRCC3P46736 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.06■□□□□ 0.64
BRCC3P46736 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BRCC3P46736 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BRCC3P46736 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.06■□□□□ 0.64
BRCC3P46736 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.06■□□□□ 0.64
BRCC3P46736 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
BRCC3P46736 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
BRCC3P46736 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.06■□□□□ 0.64
BRCC3P46736 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.06■□□□□ 0.64
BRCC3P46736 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BRCC3P46736 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BRCC3P46736 FAM220CP-201ENST00000395253 831 ntBASIC19.06■□□□□ 0.64
BRCC3P46736 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.06■□□□□ 0.64
BRCC3P46736 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
BRCC3P46736 HNRNPDP1-201ENST00000439535 754 ntBASIC19.06■□□□□ 0.64
BRCC3P46736 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.06■□□□□ 0.64
BRCC3P46736 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.06■□□□□ 0.64
BRCC3P46736 SART3-203ENST00000546611 1184 ntBASIC19.06■□□□□ 0.64
BRCC3P46736 AC120114.3-201ENST00000611923 658 ntBASIC19.06■□□□□ 0.64
BRCC3P46736 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.06■□□□□ 0.64
BRCC3P46736 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BRCC3P46736 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BRCC3P46736 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
BRCC3P46736 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
BRCC3P46736 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BRCC3P46736 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
BRCC3P46736 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
BRCC3P46736 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BRCC3P46736 AC104581.1-202ENST00000635932 2618 ntBASIC19.05■□□□□ 0.64
BRCC3P46736 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BRCC3P46736 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BRCC3P46736 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BRCC3P46736 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BRCC3P46736 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BRCC3P46736 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.05■□□□□ 0.64
BRCC3P46736 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BRCC3P46736 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BRCC3P46736 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
BRCC3P46736 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.05■□□□□ 0.64
BRCC3P46736 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BRCC3P46736 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
BRCC3P46736 AL590627.1-203ENST00000421194 1026 ntBASIC19.05■□□□□ 0.64
BRCC3P46736 AC096633.1-201ENST00000422446 749 ntBASIC19.05■□□□□ 0.64
BRCC3P46736 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.05■□□□□ 0.64
BRCC3P46736 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
BRCC3P46736 AC073648.2-201ENST00000510116 352 ntBASIC19.05■□□□□ 0.64
BRCC3P46736 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.05■□□□□ 0.64
BRCC3P46736 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BRCC3P46736 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BRCC3P46736 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BRCC3P46736 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.05■□□□□ 0.64
BRCC3P46736 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.05■□□□□ 0.64
BRCC3P46736 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
BRCC3P46736 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.05■□□□□ 0.64
BRCC3P46736 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.05■□□□□ 0.64
BRCC3P46736 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
BRCC3P46736 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BRCC3P46736 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BRCC3P46736 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.05■□□□□ 0.64
BRCC3P46736 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
BRCC3P46736 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BRCC3P46736 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
BRCC3P46736 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.05■□□□□ 0.64
BRCC3P46736 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
BRCC3P46736 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
BRCC3P46736 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BRCC3P46736 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
BRCC3P46736 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.04■□□□□ 0.64
BRCC3P46736 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRCC3P46736 AC022898.2-201ENST00000616822 1312 ntBASIC19.04■□□□□ 0.64
BRCC3P46736 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BRCC3P46736 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms