Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
ATP6V1AP38606 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
ATP6V1AP38606 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
ATP6V1AP38606 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
ATP6V1AP38606 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
ATP6V1AP38606 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
ATP6V1AP38606 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC22.79■■□□□ 1.24
ATP6V1AP38606 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
ATP6V1AP38606 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC22.79■■□□□ 1.24
ATP6V1AP38606 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC22.79■■□□□ 1.24
ATP6V1AP38606 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC22.79■■□□□ 1.24
ATP6V1AP38606 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
ATP6V1AP38606 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
ATP6V1AP38606 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
ATP6V1AP38606 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
ATP6V1AP38606 ELK2BP-201ENST00000415014 1224 ntBASIC22.79■■□□□ 1.24
ATP6V1AP38606 HTR5BP-201ENST00000430851 1154 ntBASIC22.79■■□□□ 1.24
ATP6V1AP38606 PON3-205ENST00000451904 1053 ntTSL 3 BASIC22.79■■□□□ 1.24
ATP6V1AP38606 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC22.79■■□□□ 1.24
ATP6V1AP38606 RFPL4AP1-201ENST00000530883 850 ntBASIC22.79■■□□□ 1.24
ATP6V1AP38606 AC018845.2-201ENST00000568326 409 ntBASIC22.79■■□□□ 1.24
ATP6V1AP38606 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
ATP6V1AP38606 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC22.79■■□□□ 1.24
ATP6V1AP38606 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC22.79■■□□□ 1.24
ATP6V1AP38606 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
ATP6V1AP38606 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
ATP6V1AP38606 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
ATP6V1AP38606 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
ATP6V1AP38606 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
ATP6V1AP38606 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
ATP6V1AP38606 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
ATP6V1AP38606 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.78■■□□□ 1.24
ATP6V1AP38606 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC22.78■■□□□ 1.24
ATP6V1AP38606 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
ATP6V1AP38606 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
ATP6V1AP38606 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
ATP6V1AP38606 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC22.78■■□□□ 1.24
ATP6V1AP38606 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
ATP6V1AP38606 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
ATP6V1AP38606 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
ATP6V1AP38606 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
ATP6V1AP38606 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
ATP6V1AP38606 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC22.78■■□□□ 1.24
ATP6V1AP38606 AC254562.1-201ENST00000417586 456 ntBASIC22.78■■□□□ 1.24
ATP6V1AP38606 AL020989.1-201ENST00000422979 469 ntBASIC22.78■■□□□ 1.24
ATP6V1AP38606 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC22.78■■□□□ 1.24
ATP6V1AP38606 CYMP-203ENST00000474680 1263 ntBASIC22.78■■□□□ 1.24
ATP6V1AP38606 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC22.78■■□□□ 1.24
ATP6V1AP38606 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
ATP6V1AP38606 SIRPAP1-201ENST00000448467 1770 ntBASIC22.78■■□□□ 1.24
ATP6V1AP38606 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
ATP6V1AP38606 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
ATP6V1AP38606 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC22.78■■□□□ 1.24
ATP6V1AP38606 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
ATP6V1AP38606 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
ATP6V1AP38606 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
ATP6V1AP38606 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
ATP6V1AP38606 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC22.77■■□□□ 1.24
ATP6V1AP38606 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
ATP6V1AP38606 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC22.77■■□□□ 1.24
ATP6V1AP38606 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
ATP6V1AP38606 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC22.77■■□□□ 1.24
ATP6V1AP38606 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC22.77■■□□□ 1.24
ATP6V1AP38606 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC22.77■■□□□ 1.24
ATP6V1AP38606 AC108073.2-201ENST00000464002 357 ntBASIC22.77■■□□□ 1.24
ATP6V1AP38606 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
ATP6V1AP38606 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
ATP6V1AP38606 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
ATP6V1AP38606 MIR4751-201ENST00000578027 74 ntBASIC22.77■■□□□ 1.24
ATP6V1AP38606 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC22.77■■□□□ 1.24
ATP6V1AP38606 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC22.77■■□□□ 1.24
ATP6V1AP38606 AL513190.1-201ENST00000621254 727 ntBASIC22.77■■□□□ 1.24
ATP6V1AP38606 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
ATP6V1AP38606 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
ATP6V1AP38606 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
ATP6V1AP38606 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC22.77■■□□□ 1.24
ATP6V1AP38606 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
ATP6V1AP38606 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC22.77■■□□□ 1.24
ATP6V1AP38606 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
ATP6V1AP38606 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
ATP6V1AP38606 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
ATP6V1AP38606 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC22.76■■□□□ 1.23
ATP6V1AP38606 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
ATP6V1AP38606 COX5BP2-201ENST00000392354 334 ntBASIC22.76■■□□□ 1.23
ATP6V1AP38606 VN2R19P-201ENST00000442399 1052 ntBASIC22.76■■□□□ 1.23
ATP6V1AP38606 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
ATP6V1AP38606 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC22.76■■□□□ 1.23
ATP6V1AP38606 ARTN-206ENST00000472435 402 ntTSL 3 BASIC22.76■■□□□ 1.23
ATP6V1AP38606 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
ATP6V1AP38606 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
ATP6V1AP38606 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC22.76■■□□□ 1.23
ATP6V1AP38606 C20orf181-201ENST00000623918 480 ntBASIC22.76■■□□□ 1.23
ATP6V1AP38606 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
ATP6V1AP38606 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
ATP6V1AP38606 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC22.76■■□□□ 1.23
ATP6V1AP38606 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
ATP6V1AP38606 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
ATP6V1AP38606 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
ATP6V1AP38606 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC22.75■■□□□ 1.23
ATP6V1AP38606 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC22.75■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms