Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC22.48■■□□□ 1.19
RFC4P35249 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RFC4P35249 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC22.48■■□□□ 1.19
RFC4P35249 CEND1P1-201ENST00000451006 455 ntBASIC22.48■■□□□ 1.19
RFC4P35249 PON3-205ENST00000451904 1053 ntTSL 3 BASIC22.48■■□□□ 1.19
RFC4P35249 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC22.48■■□□□ 1.19
RFC4P35249 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC22.48■■□□□ 1.19
RFC4P35249 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC22.48■■□□□ 1.19
RFC4P35249 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
RFC4P35249 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
RFC4P35249 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RFC4P35249 GPR89P-201ENST00000407924 1495 ntBASIC22.47■■□□□ 1.19
RFC4P35249 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RFC4P35249 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC22.47■■□□□ 1.19
RFC4P35249 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RFC4P35249 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC22.47■■□□□ 1.19
RFC4P35249 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RFC4P35249 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC22.47■■□□□ 1.19
RFC4P35249 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
RFC4P35249 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
RFC4P35249 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
RFC4P35249 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RFC4P35249 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RFC4P35249 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC22.47■■□□□ 1.19
RFC4P35249 FAM8A3P-201ENST00000427218 844 ntBASIC22.47■■□□□ 1.19
RFC4P35249 PRSS29P-201ENST00000440800 595 ntBASIC22.47■■□□□ 1.19
RFC4P35249 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC22.47■■□□□ 1.19
RFC4P35249 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC22.47■■□□□ 1.19
RFC4P35249 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC22.47■■□□□ 1.19
RFC4P35249 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC22.47■■□□□ 1.19
RFC4P35249 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC22.47■■□□□ 1.19
RFC4P35249 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC22.47■■□□□ 1.19
RFC4P35249 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC22.47■■□□□ 1.19
RFC4P35249 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RFC4P35249 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC22.46■■□□□ 1.19
RFC4P35249 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC22.46■■□□□ 1.19
RFC4P35249 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RFC4P35249 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
RFC4P35249 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC22.46■■□□□ 1.19
RFC4P35249 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC22.46■■□□□ 1.19
RFC4P35249 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RFC4P35249 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
RFC4P35249 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC22.46■■□□□ 1.19
RFC4P35249 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
RFC4P35249 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RFC4P35249 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC22.46■■□□□ 1.19
RFC4P35249 IGHV3-65-201ENST00000523210 341 ntBASIC22.46■■□□□ 1.19
RFC4P35249 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC22.46■■□□□ 1.19
RFC4P35249 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RFC4P35249 AC106028.4-201ENST00000614509 607 ntBASIC22.46■■□□□ 1.19
RFC4P35249 AC004790.2-201ENST00000623588 572 ntBASIC22.46■■□□□ 1.19
RFC4P35249 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RFC4P35249 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC22.46■■□□□ 1.19
RFC4P35249 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RFC4P35249 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
RFC4P35249 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RFC4P35249 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC22.46■■□□□ 1.19
RFC4P35249 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.19
RFC4P35249 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC22.45■■□□□ 1.19
RFC4P35249 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC22.45■■□□□ 1.19
RFC4P35249 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.19
RFC4P35249 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC22.45■■□□□ 1.18
RFC4P35249 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.18
RFC4P35249 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
RFC4P35249 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RFC4P35249 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RFC4P35249 COX5BP2-201ENST00000392354 334 ntBASIC22.45■■□□□ 1.18
RFC4P35249 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
RFC4P35249 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
RFC4P35249 RPS15P9-201ENST00000494093 319 ntBASIC22.45■■□□□ 1.18
RFC4P35249 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
RFC4P35249 AC008667.4-201ENST00000607370 168 ntBASIC22.45■■□□□ 1.18
RFC4P35249 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC22.45■■□□□ 1.18
RFC4P35249 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RFC4P35249 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
RFC4P35249 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC22.45■■□□□ 1.18
RFC4P35249 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
RFC4P35249 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
RFC4P35249 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC22.45■■□□□ 1.18
RFC4P35249 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RFC4P35249 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RFC4P35249 SYS1-203ENST00000414310 795 ntTSL 3 BASIC22.44■■□□□ 1.18
RFC4P35249 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC22.44■■□□□ 1.18
RFC4P35249 NCF1C-201ENST00000438382 1427 ntBASIC22.44■■□□□ 1.18
RFC4P35249 SIRPAP1-201ENST00000448467 1770 ntBASIC22.44■■□□□ 1.18
RFC4P35249 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC22.44■■□□□ 1.18
RFC4P35249 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC22.44■■□□□ 1.18
RFC4P35249 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC22.44■■□□□ 1.18
RFC4P35249 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RFC4P35249 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC22.44■■□□□ 1.18
RFC4P35249 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC22.44■■□□□ 1.18
RFC4P35249 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC22.44■■□□□ 1.18
RFC4P35249 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RFC4P35249 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RFC4P35249 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RFC4P35249 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC22.43■■□□□ 1.18
RFC4P35249 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RFC4P35249 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RFC4P35249 MIR770-201ENST00000390219 98 ntBASIC22.43■■□□□ 1.18
RFC4P35249 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms