Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.77■□□□□ 0.44
COL6A2P12110 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.77■□□□□ 0.44
COL6A2P12110 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.77■□□□□ 0.44
COL6A2P12110 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
COL6A2P12110 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.77■□□□□ 0.44
COL6A2P12110 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.77■□□□□ 0.44
COL6A2P12110 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.77■□□□□ 0.44
COL6A2P12110 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
COL6A2P12110 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
COL6A2P12110 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
COL6A2P12110 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
COL6A2P12110 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
COL6A2P12110 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.77■□□□□ 0.43
COL6A2P12110 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
COL6A2P12110 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.77■□□□□ 0.43
COL6A2P12110 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
COL6A2P12110 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
COL6A2P12110 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL6A2P12110 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL6A2P12110 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL6A2P12110 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.76■□□□□ 0.43
COL6A2P12110 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL6A2P12110 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.76■□□□□ 0.43
COL6A2P12110 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL6A2P12110 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
COL6A2P12110 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.76■□□□□ 0.43
COL6A2P12110 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL6A2P12110 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL6A2P12110 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL6A2P12110 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
COL6A2P12110 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.76■□□□□ 0.43
COL6A2P12110 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.76■□□□□ 0.43
COL6A2P12110 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.76■□□□□ 0.43
COL6A2P12110 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.76■□□□□ 0.43
COL6A2P12110 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
COL6A2P12110 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
COL6A2P12110 AC009053.2-201ENST00000563701 2365 ntBASIC17.76■□□□□ 0.43
COL6A2P12110 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
COL6A2P12110 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
COL6A2P12110 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL6A2P12110 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
COL6A2P12110 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.76■□□□□ 0.43
COL6A2P12110 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.76■□□□□ 0.43
COL6A2P12110 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
COL6A2P12110 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL6A2P12110 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.76■□□□□ 0.43
COL6A2P12110 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
COL6A2P12110 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.75■□□□□ 0.43
COL6A2P12110 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL6A2P12110 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL6A2P12110 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL6A2P12110 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
COL6A2P12110 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.75■□□□□ 0.43
COL6A2P12110 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL6A2P12110 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL6A2P12110 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.75■□□□□ 0.43
COL6A2P12110 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.75■□□□□ 0.43
COL6A2P12110 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.75■□□□□ 0.43
COL6A2P12110 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL6A2P12110 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.75■□□□□ 0.43
COL6A2P12110 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL6A2P12110 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
COL6A2P12110 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.75■□□□□ 0.43
COL6A2P12110 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.75■□□□□ 0.43
COL6A2P12110 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL6A2P12110 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.75■□□□□ 0.43
COL6A2P12110 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
COL6A2P12110 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.75■□□□□ 0.43
COL6A2P12110 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL6A2P12110 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL6A2P12110 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL6A2P12110 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
COL6A2P12110 AP000523.1-201ENST00000398242 1049 ntBASIC17.75■□□□□ 0.43
COL6A2P12110 HMGA1P5-201ENST00000412453 271 ntBASIC17.75■□□□□ 0.43
COL6A2P12110 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
COL6A2P12110 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.75■□□□□ 0.43
COL6A2P12110 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.75■□□□□ 0.43
COL6A2P12110 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.75■□□□□ 0.43
COL6A2P12110 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL6A2P12110 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.75■□□□□ 0.43
COL6A2P12110 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.75■□□□□ 0.43
COL6A2P12110 LINC01451-201ENST00000623792 534 ntBASIC17.75■□□□□ 0.43
COL6A2P12110 AP006294.2-201ENST00000641667 209 ntBASIC17.75■□□□□ 0.43
COL6A2P12110 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
COL6A2P12110 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL6A2P12110 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL6A2P12110 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL6A2P12110 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
COL6A2P12110 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL6A2P12110 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL6A2P12110 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.75■□□□□ 0.43
COL6A2P12110 LINC00304-203ENST00000565008 1864 ntBASIC17.75■□□□□ 0.43
COL6A2P12110 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL6A2P12110 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
COL6A2P12110 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL6A2P12110 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
COL6A2P12110 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL6A2P12110 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL6A2P12110 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL6A2P12110 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms