Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
CSB-PGBD3P0DP91 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CSB-PGBD3P0DP91 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC23.73■■□□□ 1.39
CSB-PGBD3P0DP91 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CSB-PGBD3P0DP91 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC23.73■■□□□ 1.39
CSB-PGBD3P0DP91 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC23.72■■□□□ 1.39
CSB-PGBD3P0DP91 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC23.72■■□□□ 1.39
CSB-PGBD3P0DP91 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC23.72■■□□□ 1.39
CSB-PGBD3P0DP91 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CSB-PGBD3P0DP91 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CSB-PGBD3P0DP91 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CSB-PGBD3P0DP91 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CSB-PGBD3P0DP91 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC23.72■■□□□ 1.39
CSB-PGBD3P0DP91 SPDYE21P-201ENST00000413323 827 ntBASIC23.72■■□□□ 1.39
CSB-PGBD3P0DP91 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC23.72■■□□□ 1.39
CSB-PGBD3P0DP91 AC122714.2-201ENST00000502787 707 ntBASIC23.72■■□□□ 1.39
CSB-PGBD3P0DP91 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC23.72■■□□□ 1.39
CSB-PGBD3P0DP91 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC23.72■■□□□ 1.39
CSB-PGBD3P0DP91 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC23.72■■□□□ 1.39
CSB-PGBD3P0DP91 SNHG9-202ENST00000564014 471 ntBASIC23.72■■□□□ 1.39
CSB-PGBD3P0DP91 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
CSB-PGBD3P0DP91 AC005829.1-201ENST00000570002 483 ntBASIC23.72■■□□□ 1.39
CSB-PGBD3P0DP91 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC23.72■■□□□ 1.39
CSB-PGBD3P0DP91 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CSB-PGBD3P0DP91 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC23.72■■□□□ 1.39
CSB-PGBD3P0DP91 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC23.72■■□□□ 1.39
CSB-PGBD3P0DP91 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
CSB-PGBD3P0DP91 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC23.72■■□□□ 1.39
CSB-PGBD3P0DP91 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CSB-PGBD3P0DP91 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CSB-PGBD3P0DP91 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
CSB-PGBD3P0DP91 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CSB-PGBD3P0DP91 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CSB-PGBD3P0DP91 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC23.71■■□□□ 1.39
CSB-PGBD3P0DP91 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC23.71■■□□□ 1.39
CSB-PGBD3P0DP91 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
CSB-PGBD3P0DP91 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC23.71■■□□□ 1.39
CSB-PGBD3P0DP91 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC23.71■■□□□ 1.39
CSB-PGBD3P0DP91 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CSB-PGBD3P0DP91 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
CSB-PGBD3P0DP91 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CSB-PGBD3P0DP91 AC096633.1-201ENST00000422446 749 ntBASIC23.71■■□□□ 1.39
CSB-PGBD3P0DP91 MCCD1P2-201ENST00000423228 335 ntBASIC23.71■■□□□ 1.39
CSB-PGBD3P0DP91 NKTR-203ENST00000442970 646 ntTSL 2 BASIC23.71■■□□□ 1.39
CSB-PGBD3P0DP91 PRYP5-201ENST00000451909 266 ntBASIC23.71■■□□□ 1.39
CSB-PGBD3P0DP91 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC23.71■■□□□ 1.39
CSB-PGBD3P0DP91 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC23.71■■□□□ 1.39
CSB-PGBD3P0DP91 COX5A-206ENST00000568783 571 ntTSL 3 BASIC23.71■■□□□ 1.39
CSB-PGBD3P0DP91 TCAP-202ENST00000578283 583 ntTSL 5 BASIC23.71■■□□□ 1.39
CSB-PGBD3P0DP91 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC23.71■■□□□ 1.39
CSB-PGBD3P0DP91 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC23.71■■□□□ 1.39
CSB-PGBD3P0DP91 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC23.71■■□□□ 1.39
CSB-PGBD3P0DP91 AC073592.5-201ENST00000624854 528 ntBASIC23.71■■□□□ 1.39
CSB-PGBD3P0DP91 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CSB-PGBD3P0DP91 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC23.71■■□□□ 1.39
CSB-PGBD3P0DP91 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
CSB-PGBD3P0DP91 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.39
CSB-PGBD3P0DP91 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
CSB-PGBD3P0DP91 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.39
CSB-PGBD3P0DP91 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.39
CSB-PGBD3P0DP91 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CSB-PGBD3P0DP91 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
CSB-PGBD3P0DP91 METTL26-205ENST00000397666 726 ntTSL 2 BASIC23.7■■□□□ 1.38
CSB-PGBD3P0DP91 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC23.7■■□□□ 1.38
CSB-PGBD3P0DP91 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC23.7■■□□□ 1.38
CSB-PGBD3P0DP91 CFL1-202ENST00000524553 860 ntTSL 2 BASIC23.7■■□□□ 1.38
CSB-PGBD3P0DP91 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC23.7■■□□□ 1.38
CSB-PGBD3P0DP91 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC23.7■■□□□ 1.38
CSB-PGBD3P0DP91 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC23.7■■□□□ 1.38
CSB-PGBD3P0DP91 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC23.7■■□□□ 1.38
CSB-PGBD3P0DP91 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC23.7■■□□□ 1.38
CSB-PGBD3P0DP91 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC23.7■■□□□ 1.38
CSB-PGBD3P0DP91 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
CSB-PGBD3P0DP91 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CSB-PGBD3P0DP91 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CSB-PGBD3P0DP91 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CSB-PGBD3P0DP91 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CSB-PGBD3P0DP91 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
CSB-PGBD3P0DP91 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CSB-PGBD3P0DP91 SIGLEC16-201ENST00000599858 1437 ntBASIC23.69■■□□□ 1.38
CSB-PGBD3P0DP91 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC23.69■■□□□ 1.38
CSB-PGBD3P0DP91 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CSB-PGBD3P0DP91 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CSB-PGBD3P0DP91 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CSB-PGBD3P0DP91 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC23.69■■□□□ 1.38
CSB-PGBD3P0DP91 ALG1L5P-201ENST00000482043 771 ntBASIC23.69■■□□□ 1.38
CSB-PGBD3P0DP91 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC23.69■■□□□ 1.38
CSB-PGBD3P0DP91 MIR4469-201ENST00000583919 79 ntBASIC23.69■■□□□ 1.38
CSB-PGBD3P0DP91 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CSB-PGBD3P0DP91 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
CSB-PGBD3P0DP91 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CSB-PGBD3P0DP91 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CSB-PGBD3P0DP91 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
CSB-PGBD3P0DP91 ANO7L1-203ENST00000602586 1720 ntBASIC23.68■■□□□ 1.38
CSB-PGBD3P0DP91 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC23.68■■□□□ 1.38
CSB-PGBD3P0DP91 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CSB-PGBD3P0DP91 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CSB-PGBD3P0DP91 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
CSB-PGBD3P0DP91 CRYGEP-201ENST00000412192 528 ntBASIC23.68■■□□□ 1.38
CSB-PGBD3P0DP91 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms