Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCNYL3P0C7X3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCNYL3P0C7X3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.36■□□□□ 0.37
CCNYL3P0C7X3 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CCNYL3P0C7X3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCNYL3P0C7X3 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCNYL3P0C7X3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.36■□□□□ 0.37
CCNYL3P0C7X3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCNYL3P0C7X3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.36■□□□□ 0.37
CCNYL3P0C7X3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCNYL3P0C7X3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.36■□□□□ 0.37
CCNYL3P0C7X3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.36■□□□□ 0.37
CCNYL3P0C7X3 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.36■□□□□ 0.37
CCNYL3P0C7X3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.36■□□□□ 0.37
CCNYL3P0C7X3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCNYL3P0C7X3 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CCNYL3P0C7X3 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCNYL3P0C7X3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.36■□□□□ 0.37
CCNYL3P0C7X3 KRT89P-201ENST00000620027 1478 ntBASIC17.36■□□□□ 0.37
CCNYL3P0C7X3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.36■□□□□ 0.37
CCNYL3P0C7X3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCNYL3P0C7X3 AC135050.7-201ENST00000624508 2218 ntBASIC17.36■□□□□ 0.37
CCNYL3P0C7X3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCNYL3P0C7X3 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCNYL3P0C7X3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCNYL3P0C7X3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.35■□□□□ 0.37
CCNYL3P0C7X3 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CCNYL3P0C7X3 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCNYL3P0C7X3 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.35■□□□□ 0.37
CCNYL3P0C7X3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCNYL3P0C7X3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCNYL3P0C7X3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.35■□□□□ 0.37
CCNYL3P0C7X3 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.35■□□□□ 0.37
CCNYL3P0C7X3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCNYL3P0C7X3 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCNYL3P0C7X3 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CCNYL3P0C7X3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCNYL3P0C7X3 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCNYL3P0C7X3 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCNYL3P0C7X3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCNYL3P0C7X3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCNYL3P0C7X3 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.35■□□□□ 0.37
CCNYL3P0C7X3 KRT17P6-201ENST00000453795 1220 ntBASIC17.35■□□□□ 0.37
CCNYL3P0C7X3 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCNYL3P0C7X3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.35■□□□□ 0.37
CCNYL3P0C7X3 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.35■□□□□ 0.37
CCNYL3P0C7X3 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CCNYL3P0C7X3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCNYL3P0C7X3 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.35■□□□□ 0.37
CCNYL3P0C7X3 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCNYL3P0C7X3 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCNYL3P0C7X3 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.35■□□□□ 0.37
CCNYL3P0C7X3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCNYL3P0C7X3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCNYL3P0C7X3 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCNYL3P0C7X3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCNYL3P0C7X3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCNYL3P0C7X3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCNYL3P0C7X3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.35■□□□□ 0.37
CCNYL3P0C7X3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CCNYL3P0C7X3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.35■□□□□ 0.37
CCNYL3P0C7X3 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCNYL3P0C7X3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCNYL3P0C7X3 AL390961.4-201ENST00000623958 2535 ntBASIC17.35■□□□□ 0.37
CCNYL3P0C7X3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCNYL3P0C7X3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCNYL3P0C7X3 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCNYL3P0C7X3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCNYL3P0C7X3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCNYL3P0C7X3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCNYL3P0C7X3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCNYL3P0C7X3 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCNYL3P0C7X3 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCNYL3P0C7X3 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCNYL3P0C7X3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCNYL3P0C7X3 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCNYL3P0C7X3 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CCNYL3P0C7X3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCNYL3P0C7X3 AL353692.3-201ENST00000407031 1396 ntBASIC17.34■□□□□ 0.37
CCNYL3P0C7X3 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCNYL3P0C7X3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.34■□□□□ 0.37
CCNYL3P0C7X3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCNYL3P0C7X3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.34■□□□□ 0.37
CCNYL3P0C7X3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCNYL3P0C7X3 KRT18P31-201ENST00000506277 1292 ntBASIC17.34■□□□□ 0.37
CCNYL3P0C7X3 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCNYL3P0C7X3 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.34■□□□□ 0.37
CCNYL3P0C7X3 AC233702.3-201ENST00000578656 1387 ntBASIC17.34■□□□□ 0.37
CCNYL3P0C7X3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
CCNYL3P0C7X3 AC008687.5-201ENST00000593746 558 ntBASIC17.34■□□□□ 0.37
CCNYL3P0C7X3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.34■□□□□ 0.37
CCNYL3P0C7X3 AL732292.2-201ENST00000609649 430 ntBASIC17.34■□□□□ 0.37
CCNYL3P0C7X3 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCNYL3P0C7X3 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.34■□□□□ 0.37
CCNYL3P0C7X3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCNYL3P0C7X3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCNYL3P0C7X3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.33■□□□□ 0.37
CCNYL3P0C7X3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CCNYL3P0C7X3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCNYL3P0C7X3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms