Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SFTPBP07988 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SFTPBP07988 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.64■□□□□ 0.09
SFTPBP07988 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.64■□□□□ 0.09
SFTPBP07988 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SFTPBP07988 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.64■□□□□ 0.09
SFTPBP07988 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SFTPBP07988 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SFTPBP07988 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.64■□□□□ 0.09
SFTPBP07988 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
SFTPBP07988 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.64■□□□□ 0.09
SFTPBP07988 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SFTPBP07988 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SFTPBP07988 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SFTPBP07988 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
SFTPBP07988 LIN28AP1-201ENST00000429574 405 ntBASIC15.64■□□□□ 0.09
SFTPBP07988 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SFTPBP07988 ATP5G1P1-201ENST00000448724 379 ntBASIC15.64■□□□□ 0.09
SFTPBP07988 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SFTPBP07988 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.64■□□□□ 0.09
SFTPBP07988 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SFTPBP07988 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SFTPBP07988 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SFTPBP07988 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SFTPBP07988 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
SFTPBP07988 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SFTPBP07988 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.64■□□□□ 0.09
SFTPBP07988 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SFTPBP07988 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SFTPBP07988 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SFTPBP07988 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SFTPBP07988 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SFTPBP07988 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SFTPBP07988 AC138028.4-201ENST00000564984 1845 ntBASIC15.64■□□□□ 0.09
SFTPBP07988 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
SFTPBP07988 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.63■□□□□ 0.09
SFTPBP07988 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SFTPBP07988 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.63■□□□□ 0.09
SFTPBP07988 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SFTPBP07988 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.63■□□□□ 0.09
SFTPBP07988 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
SFTPBP07988 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SFTPBP07988 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SFTPBP07988 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
SFTPBP07988 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SFTPBP07988 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SFTPBP07988 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.63■□□□□ 0.09
SFTPBP07988 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.63■□□□□ 0.09
SFTPBP07988 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SFTPBP07988 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SFTPBP07988 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.63■□□□□ 0.09
SFTPBP07988 AC007663.1-201ENST00000438948 1240 ntBASIC15.63■□□□□ 0.09
SFTPBP07988 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SFTPBP07988 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SFTPBP07988 AL023803.3-201ENST00000615559 522 ntBASIC15.63■□□□□ 0.09
SFTPBP07988 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.63■□□□□ 0.09
SFTPBP07988 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SFTPBP07988 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SFTPBP07988 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SFTPBP07988 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.63■□□□□ 0.09
SFTPBP07988 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.63■□□□□ 0.09
SFTPBP07988 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SFTPBP07988 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.63■□□□□ 0.09
SFTPBP07988 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SFTPBP07988 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SFTPBP07988 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
SFTPBP07988 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SFTPBP07988 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SFTPBP07988 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SFTPBP07988 GMCL1P1-201ENST00000463439 1581 ntBASIC15.62■□□□□ 0.09
SFTPBP07988 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.62■□□□□ 0.09
SFTPBP07988 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
SFTPBP07988 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
SFTPBP07988 AC092338.2-201ENST00000568827 1415 ntBASIC15.62■□□□□ 0.09
SFTPBP07988 AC073508.3-201ENST00000619697 1419 ntBASIC15.62■□□□□ 0.09
SFTPBP07988 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SFTPBP07988 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SFTPBP07988 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SFTPBP07988 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.62■□□□□ 0.09
SFTPBP07988 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
SFTPBP07988 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SFTPBP07988 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.62■□□□□ 0.09
SFTPBP07988 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.62■□□□□ 0.09
SFTPBP07988 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.62■□□□□ 0.09
SFTPBP07988 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.62■□□□□ 0.09
SFTPBP07988 AP003041.3-201ENST00000527151 707 ntBASIC15.62■□□□□ 0.09
SFTPBP07988 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.62■□□□□ 0.09
SFTPBP07988 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.62■□□□□ 0.09
SFTPBP07988 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.62■□□□□ 0.09
SFTPBP07988 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
SFTPBP07988 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SFTPBP07988 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
SFTPBP07988 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
SFTPBP07988 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.62■□□□□ 0.09
SFTPBP07988 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.62■□□□□ 0.09
SFTPBP07988 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SFTPBP07988 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
SFTPBP07988 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.62■□□□□ 0.09
SFTPBP07988 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
SFTPBP07988 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms