Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COL1A1P02452 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COL1A1P02452 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
COL1A1P02452 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL1A1P02452 BX005266.1-201ENST00000473402 457 ntBASIC21.52■■□□□ 1.04
COL1A1P02452 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC21.52■■□□□ 1.04
COL1A1P02452 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC21.52■■□□□ 1.04
COL1A1P02452 RNF151-202ENST00000569210 853 ntTSL 2 BASIC21.52■■□□□ 1.04
COL1A1P02452 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC21.52■■□□□ 1.04
COL1A1P02452 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC21.52■■□□□ 1.04
COL1A1P02452 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.52■■□□□ 1.04
COL1A1P02452 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COL1A1P02452 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.52■■□□□ 1.04
COL1A1P02452 HLA-J-201ENST00000462773 1622 ntBASIC21.52■■□□□ 1.04
COL1A1P02452 AC148477.5-201ENST00000625164 1645 ntBASIC21.52■■□□□ 1.04
COL1A1P02452 REXO1L9P-201ENST00000604264 2108 ntBASIC21.52■■□□□ 1.04
COL1A1P02452 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COL1A1P02452 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
COL1A1P02452 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL1A1P02452 AC104581.1-202ENST00000635932 2618 ntBASIC21.52■■□□□ 1.04
COL1A1P02452 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.52■■□□□ 1.04
COL1A1P02452 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.52■■□□□ 1.03
COL1A1P02452 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
COL1A1P02452 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
COL1A1P02452 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
COL1A1P02452 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
COL1A1P02452 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC21.52■■□□□ 1.03
COL1A1P02452 RAB17-203ENST00000409576 466 ntTSL 3 BASIC21.52■■□□□ 1.03
COL1A1P02452 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
COL1A1P02452 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
COL1A1P02452 Z83851.2-201ENST00000609564 659 ntBASIC21.52■■□□□ 1.03
COL1A1P02452 AC019129.2-201ENST00000609837 1235 ntBASIC21.52■■□□□ 1.03
COL1A1P02452 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC21.52■■□□□ 1.03
COL1A1P02452 SIRPAP1-201ENST00000448467 1770 ntBASIC21.51■■□□□ 1.03
COL1A1P02452 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC21.51■■□□□ 1.03
COL1A1P02452 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL1A1P02452 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL1A1P02452 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL1A1P02452 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL1A1P02452 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC21.51■■□□□ 1.03
COL1A1P02452 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COL1A1P02452 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.51■■□□□ 1.03
COL1A1P02452 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC21.51■■□□□ 1.03
COL1A1P02452 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL1A1P02452 TBC1D3P5-201ENST00000579401 1545 ntBASIC21.51■■□□□ 1.03
COL1A1P02452 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COL1A1P02452 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL1A1P02452 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COL1A1P02452 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC21.51■■□□□ 1.03
COL1A1P02452 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC21.51■■□□□ 1.03
COL1A1P02452 MIR940-201ENST00000401276 94 ntBASIC21.51■■□□□ 1.03
COL1A1P02452 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL1A1P02452 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC21.51■■□□□ 1.03
COL1A1P02452 OR7E14P-202ENST00000530490 1290 ntBASIC21.51■■□□□ 1.03
COL1A1P02452 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC21.51■■□□□ 1.03
COL1A1P02452 MTDHP4-201ENST00000600287 670 ntBASIC21.51■■□□□ 1.03
COL1A1P02452 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL1A1P02452 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL1A1P02452 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL1A1P02452 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL1A1P02452 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
COL1A1P02452 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
COL1A1P02452 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.5■■□□□ 1.03
COL1A1P02452 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
COL1A1P02452 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL1A1P02452 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL1A1P02452 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC21.5■■□□□ 1.03
COL1A1P02452 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC21.5■■□□□ 1.03
COL1A1P02452 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.5■■□□□ 1.03
COL1A1P02452 AC009949.1-201ENST00000623048 1830 ntBASIC21.5■■□□□ 1.03
COL1A1P02452 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL1A1P02452 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL1A1P02452 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL1A1P02452 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL1A1P02452 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL1A1P02452 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC21.5■■□□□ 1.03
COL1A1P02452 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC21.5■■□□□ 1.03
COL1A1P02452 NMU-202ENST00000505262 693 ntTSL 3 BASIC21.5■■□□□ 1.03
COL1A1P02452 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COL1A1P02452 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.5■■□□□ 1.03
COL1A1P02452 AL691403.2-201ENST00000618460 490 ntBASIC21.5■■□□□ 1.03
COL1A1P02452 AC008735.5-201ENST00000623544 497 ntBASIC21.5■■□□□ 1.03
COL1A1P02452 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC21.5■■□□□ 1.03
COL1A1P02452 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL1A1P02452 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL1A1P02452 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC21.5■■□□□ 1.03
COL1A1P02452 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL1A1P02452 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL1A1P02452 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL1A1P02452 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
COL1A1P02452 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC21.49■■□□□ 1.03
COL1A1P02452 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL1A1P02452 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
COL1A1P02452 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.49■■□□□ 1.03
COL1A1P02452 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.49■■□□□ 1.03
COL1A1P02452 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL1A1P02452 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.49■■□□□ 1.03
COL1A1P02452 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21.49■■□□□ 1.03
COL1A1P02452 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL1A1P02452 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms