Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.66■□□□□ 0.58
MSI1O43347 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
MSI1O43347 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MSI1O43347 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MSI1O43347 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
MSI1O43347 KRT8P47-201ENST00000604727 1398 ntBASIC18.66■□□□□ 0.58
MSI1O43347 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.66■□□□□ 0.58
MSI1O43347 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.66■□□□□ 0.58
MSI1O43347 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
MSI1O43347 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MSI1O43347 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.65■□□□□ 0.58
MSI1O43347 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MSI1O43347 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MSI1O43347 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MSI1O43347 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MSI1O43347 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MSI1O43347 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.65■□□□□ 0.58
MSI1O43347 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MSI1O43347 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MSI1O43347 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MSI1O43347 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MSI1O43347 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
MSI1O43347 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.65■□□□□ 0.58
MSI1O43347 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
MSI1O43347 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
MSI1O43347 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
MSI1O43347 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.65■□□□□ 0.58
MSI1O43347 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.65■□□□□ 0.58
MSI1O43347 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.65■□□□□ 0.58
MSI1O43347 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.65■□□□□ 0.58
MSI1O43347 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.65■□□□□ 0.58
MSI1O43347 AL732292.2-201ENST00000609649 430 ntBASIC18.65■□□□□ 0.58
MSI1O43347 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.65■□□□□ 0.58
MSI1O43347 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
MSI1O43347 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
MSI1O43347 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.65■□□□□ 0.58
MSI1O43347 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MSI1O43347 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.65■□□□□ 0.58
MSI1O43347 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
MSI1O43347 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
MSI1O43347 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MSI1O43347 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
MSI1O43347 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
MSI1O43347 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MSI1O43347 AL354751.1-201ENST00000412768 1863 ntBASIC18.65■□□□□ 0.58
MSI1O43347 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MSI1O43347 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.64■□□□□ 0.58
MSI1O43347 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MSI1O43347 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
MSI1O43347 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MSI1O43347 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MSI1O43347 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MSI1O43347 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MSI1O43347 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MSI1O43347 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.64■□□□□ 0.57
MSI1O43347 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MSI1O43347 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MSI1O43347 NUS1P2-201ENST00000417358 873 ntBASIC18.64■□□□□ 0.57
MSI1O43347 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.64■□□□□ 0.57
MSI1O43347 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.64■□□□□ 0.57
MSI1O43347 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.64■□□□□ 0.57
MSI1O43347 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
MSI1O43347 DUTP2-201ENST00000519164 463 ntBASIC18.64■□□□□ 0.57
MSI1O43347 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.64■□□□□ 0.57
MSI1O43347 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.64■□□□□ 0.57
MSI1O43347 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.64■□□□□ 0.57
MSI1O43347 BNIP3P18-201ENST00000593976 575 ntBASIC18.64■□□□□ 0.57
MSI1O43347 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
MSI1O43347 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MSI1O43347 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
MSI1O43347 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.64■□□□□ 0.57
MSI1O43347 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.64■□□□□ 0.57
MSI1O43347 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
MSI1O43347 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MSI1O43347 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MSI1O43347 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MSI1O43347 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
MSI1O43347 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
MSI1O43347 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
MSI1O43347 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
MSI1O43347 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MSI1O43347 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.63■□□□□ 0.57
MSI1O43347 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MSI1O43347 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
MSI1O43347 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MSI1O43347 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
MSI1O43347 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MSI1O43347 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MSI1O43347 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.63■□□□□ 0.57
MSI1O43347 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.63■□□□□ 0.57
MSI1O43347 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
MSI1O43347 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MSI1O43347 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
MSI1O43347 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MSI1O43347 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.63■□□□□ 0.57
MSI1O43347 NUS1P1-201ENST00000446295 882 ntBASIC18.63■□□□□ 0.57
MSI1O43347 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.63■□□□□ 0.57
MSI1O43347 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MSI1O43347 AC096582.2-201ENST00000510860 516 ntBASIC18.63■□□□□ 0.57
MSI1O43347 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms