Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.11■□□□□ 0.49
TRIM38O00635 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
TRIM38O00635 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM38O00635 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM38O00635 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM38O00635 TOB2P1-201ENST00000469761 992 ntBASIC18.11■□□□□ 0.49
TRIM38O00635 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.11■□□□□ 0.49
TRIM38O00635 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.11■□□□□ 0.49
TRIM38O00635 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM38O00635 AC005332.3-201ENST00000589904 676 ntBASIC18.11■□□□□ 0.49
TRIM38O00635 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.11■□□□□ 0.49
TRIM38O00635 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TRIM38O00635 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.11■□□□□ 0.49
TRIM38O00635 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM38O00635 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM38O00635 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TRIM38O00635 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM38O00635 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM38O00635 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TRIM38O00635 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM38O00635 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM38O00635 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM38O00635 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM38O00635 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TRIM38O00635 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM38O00635 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM38O00635 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TRIM38O00635 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
TRIM38O00635 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM38O00635 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIM38O00635 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM38O00635 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
TRIM38O00635 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM38O00635 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM38O00635 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIM38O00635 AC126763.1-201ENST00000552015 2118 ntBASIC18.1■□□□□ 0.49
TRIM38O00635 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM38O00635 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM38O00635 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIM38O00635 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIM38O00635 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM38O00635 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM38O00635 KRT8P32-201ENST00000512863 1461 ntBASIC18.1■□□□□ 0.49
TRIM38O00635 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIM38O00635 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM38O00635 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM38O00635 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM38O00635 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.1■□□□□ 0.49
TRIM38O00635 PVRIG2P-201ENST00000435460 978 ntBASIC18.1■□□□□ 0.49
TRIM38O00635 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIM38O00635 FOSL1P1-201ENST00000511041 816 ntBASIC18.1■□□□□ 0.49
TRIM38O00635 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIM38O00635 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.1■□□□□ 0.49
TRIM38O00635 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIM38O00635 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM38O00635 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM38O00635 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TRIM38O00635 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIM38O00635 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM38O00635 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM38O00635 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM38O00635 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM38O00635 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM38O00635 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM38O00635 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM38O00635 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM38O00635 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM38O00635 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM38O00635 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM38O00635 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM38O00635 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.09■□□□□ 0.49
TRIM38O00635 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.09■□□□□ 0.49
TRIM38O00635 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM38O00635 AP000347.1-202ENST00000435868 847 ntBASIC18.09■□□□□ 0.49
TRIM38O00635 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.09■□□□□ 0.49
TRIM38O00635 AP003733.1-201ENST00000491725 852 ntBASIC18.09■□□□□ 0.49
TRIM38O00635 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.09■□□□□ 0.49
TRIM38O00635 AC091304.2-201ENST00000564639 760 ntBASIC18.09■□□□□ 0.49
TRIM38O00635 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM38O00635 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.09■□□□□ 0.49
TRIM38O00635 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.09■□□□□ 0.49
TRIM38O00635 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM38O00635 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.09■□□□□ 0.49
TRIM38O00635 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM38O00635 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
TRIM38O00635 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM38O00635 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM38O00635 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.08■□□□□ 0.49
TRIM38O00635 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM38O00635 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
TRIM38O00635 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.08■□□□□ 0.49
TRIM38O00635 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.08■□□□□ 0.49
TRIM38O00635 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.08■□□□□ 0.49
TRIM38O00635 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM38O00635 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM38O00635 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM38O00635 AC009078.2-202ENST00000463353 338 ntBASIC18.08■□□□□ 0.48
TRIM38O00635 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.08■□□□□ 0.48
TRIM38O00635 AL390719.2-201ENST00000606993 987 ntBASIC18.08■□□□□ 0.48
TRIM38O00635 AL121772.3-201ENST00000610840 674 ntBASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms