Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 AL390961.4-201ENST00000623958 2535 ntBASIC14.18□□□□□ -0.14
LINC01548A6NM66 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01548A6NM66 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01548A6NM66 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01548A6NM66 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01548A6NM66 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC01548A6NM66 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01548A6NM66 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01548A6NM66 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC01548A6NM66 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01548A6NM66 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
LINC01548A6NM66 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
LINC01548A6NM66 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01548A6NM66 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LINC01548A6NM66 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC01548A6NM66 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01548A6NM66 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC01548A6NM66 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01548A6NM66 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC01548A6NM66 AC112698.1-201ENST00000510299 916 ntBASIC14.18□□□□□ -0.14
LINC01548A6NM66 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.18□□□□□ -0.14
LINC01548A6NM66 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.18□□□□□ -0.14
LINC01548A6NM66 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01548A6NM66 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC01548A6NM66 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01548A6NM66 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01548A6NM66 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.18□□□□□ -0.14
LINC01548A6NM66 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.18□□□□□ -0.14
LINC01548A6NM66 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01548A6NM66 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC01548A6NM66 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01548A6NM66 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01548A6NM66 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01548A6NM66 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01548A6NM66 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01548A6NM66 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01548A6NM66 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC01548A6NM66 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01548A6NM66 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01548A6NM66 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01548A6NM66 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC01548A6NM66 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC01548A6NM66 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01548A6NM66 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01548A6NM66 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01548A6NM66 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC01548A6NM66 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01548A6NM66 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01548A6NM66 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01548A6NM66 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LINC01548A6NM66 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01548A6NM66 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01548A6NM66 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC14.17□□□□□ -0.14
LINC01548A6NM66 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC01548A6NM66 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01548A6NM66 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01548A6NM66 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01548A6NM66 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LINC01548A6NM66 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01548A6NM66 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC14.17□□□□□ -0.14
LINC01548A6NM66 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01548A6NM66 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01548A6NM66 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01548A6NM66 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
LINC01548A6NM66 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01548A6NM66 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LINC01548A6NM66 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01548A6NM66 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.17□□□□□ -0.14
LINC01548A6NM66 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.17□□□□□ -0.14
LINC01548A6NM66 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
LINC01548A6NM66 AC074051.2-201ENST00000565115 352 ntBASIC14.17□□□□□ -0.14
LINC01548A6NM66 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.17□□□□□ -0.14
LINC01548A6NM66 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC01548A6NM66 CLEC4GP1-201ENST00000596555 870 ntBASIC14.17□□□□□ -0.14
LINC01548A6NM66 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01548A6NM66 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01548A6NM66 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01548A6NM66 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC01548A6NM66 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC01548A6NM66 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01548A6NM66 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC01548A6NM66 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
LINC01548A6NM66 LTB4R2-202ENST00000528054 3092 ntBASIC14.17□□□□□ -0.14
LINC01548A6NM66 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01548A6NM66 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC01548A6NM66 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.17□□□□□ -0.14
LINC01548A6NM66 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01548A6NM66 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC14.17□□□□□ -0.14
LINC01548A6NM66 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC01548A6NM66 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
LINC01548A6NM66 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01548A6NM66 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC01548A6NM66 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC01548A6NM66 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01548A6NM66 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.16□□□□□ -0.14
LINC01548A6NM66 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01548A6NM66 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01548A6NM66 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LINC01548A6NM66 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01548A6NM66 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms