Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
TCRBV4S1A1TA0A5B7 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TCRBV4S1A1TA0A5B7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC14.48□□□□□ -0.09
TCRBV4S1A1TA0A5B7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TCRBV4S1A1TA0A5B7 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TCRBV4S1A1TA0A5B7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC14.48□□□□□ -0.09
TCRBV4S1A1TA0A5B7 AC134043.2-201ENST00000624206 2238 ntBASIC14.48□□□□□ -0.09
TCRBV4S1A1TA0A5B7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TCRBV4S1A1TA0A5B7 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TCRBV4S1A1TA0A5B7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.48□□□□□ -0.09
TCRBV4S1A1TA0A5B7 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TCRBV4S1A1TA0A5B7 KRT18P48-201ENST00000434763 852 ntBASIC14.48□□□□□ -0.09
TCRBV4S1A1TA0A5B7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC14.48□□□□□ -0.09
TCRBV4S1A1TA0A5B7 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
TCRBV4S1A1TA0A5B7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.48□□□□□ -0.09
TCRBV4S1A1TA0A5B7 MIR3917-201ENST00000580971 93 ntBASIC14.48□□□□□ -0.09
TCRBV4S1A1TA0A5B7 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
TCRBV4S1A1TA0A5B7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TCRBV4S1A1TA0A5B7 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TCRBV4S1A1TA0A5B7 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TCRBV4S1A1TA0A5B7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TCRBV4S1A1TA0A5B7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TCRBV4S1A1TA0A5B7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TCRBV4S1A1TA0A5B7 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TCRBV4S1A1TA0A5B7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
TCRBV4S1A1TA0A5B7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 MIR564-202ENST00000385049 94 ntBASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 REXO1L9P-201ENST00000604264 2108 ntBASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TCRBV4S1A1TA0A5B7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TCRBV4S1A1TA0A5B7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TCRBV4S1A1TA0A5B7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TCRBV4S1A1TA0A5B7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TCRBV4S1A1TA0A5B7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TCRBV4S1A1TA0A5B7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TCRBV4S1A1TA0A5B7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TCRBV4S1A1TA0A5B7 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TCRBV4S1A1TA0A5B7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC14.46□□□□□ -0.09
TCRBV4S1A1TA0A5B7 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
TCRBV4S1A1TA0A5B7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC14.46□□□□□ -0.09
TCRBV4S1A1TA0A5B7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.09
TCRBV4S1A1TA0A5B7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TCRBV4S1A1TA0A5B7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
TCRBV4S1A1TA0A5B7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC14.46□□□□□ -0.09
TCRBV4S1A1TA0A5B7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TCRBV4S1A1TA0A5B7 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
TCRBV4S1A1TA0A5B7 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TCRBV4S1A1TA0A5B7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.46□□□□□ -0.09
TCRBV4S1A1TA0A5B7 BX276092.5-203ENST00000456199 560 ntBASIC14.46□□□□□ -0.09
TCRBV4S1A1TA0A5B7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC14.46□□□□□ -0.09
TCRBV4S1A1TA0A5B7 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14.46□□□□□ -0.09
TCRBV4S1A1TA0A5B7 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC14.46□□□□□ -0.09
TCRBV4S1A1TA0A5B7 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC14.46□□□□□ -0.09
TCRBV4S1A1TA0A5B7 AL136038.4-201ENST00000603606 1261 ntBASIC14.46□□□□□ -0.09
TCRBV4S1A1TA0A5B7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TCRBV4S1A1TA0A5B7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC14.46□□□□□ -0.09
TCRBV4S1A1TA0A5B7 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.46□□□□□ -0.09
TCRBV4S1A1TA0A5B7 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TCRBV4S1A1TA0A5B7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms