Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC163A0A0D9SF12 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC163A0A0D9SF12 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CCDC163A0A0D9SF12 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC163A0A0D9SF12 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
CCDC163A0A0D9SF12 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC163A0A0D9SF12 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC163A0A0D9SF12 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC163A0A0D9SF12 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC163A0A0D9SF12 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC163A0A0D9SF12 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC163A0A0D9SF12 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC163A0A0D9SF12 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC163A0A0D9SF12 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC163A0A0D9SF12 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
CCDC163A0A0D9SF12 AC108073.2-201ENST00000464002 357 ntBASIC17.71■□□□□ 0.43
CCDC163A0A0D9SF12 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC163A0A0D9SF12 AC092364.2-202ENST00000597012 1073 ntBASIC17.71■□□□□ 0.43
CCDC163A0A0D9SF12 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.71■□□□□ 0.43
CCDC163A0A0D9SF12 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC163A0A0D9SF12 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CCDC163A0A0D9SF12 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC163A0A0D9SF12 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC163A0A0D9SF12 NCF1C-201ENST00000438382 1427 ntBASIC17.71■□□□□ 0.43
CCDC163A0A0D9SF12 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC163A0A0D9SF12 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC163A0A0D9SF12 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CCDC163A0A0D9SF12 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC163A0A0D9SF12 GMCL1P1-201ENST00000463439 1581 ntBASIC17.7■□□□□ 0.42
CCDC163A0A0D9SF12 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC163A0A0D9SF12 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC163A0A0D9SF12 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC163A0A0D9SF12 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CCDC163A0A0D9SF12 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC163A0A0D9SF12 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC163A0A0D9SF12 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC163A0A0D9SF12 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC163A0A0D9SF12 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC163A0A0D9SF12 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC163A0A0D9SF12 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.7■□□□□ 0.42
CCDC163A0A0D9SF12 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.7■□□□□ 0.42
CCDC163A0A0D9SF12 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.7■□□□□ 0.42
CCDC163A0A0D9SF12 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CCDC163A0A0D9SF12 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CCDC163A0A0D9SF12 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.7■□□□□ 0.42
CCDC163A0A0D9SF12 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC163A0A0D9SF12 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.7■□□□□ 0.42
CCDC163A0A0D9SF12 AL513190.1-201ENST00000621254 727 ntBASIC17.7■□□□□ 0.42
CCDC163A0A0D9SF12 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC163A0A0D9SF12 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC163A0A0D9SF12 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CCDC163A0A0D9SF12 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC163A0A0D9SF12 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CCDC163A0A0D9SF12 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC163A0A0D9SF12 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC163A0A0D9SF12 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC163A0A0D9SF12 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CCDC163A0A0D9SF12 AL353593.2-201ENST00000602529 1483 ntBASIC17.69■□□□□ 0.42
CCDC163A0A0D9SF12 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC163A0A0D9SF12 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC163A0A0D9SF12 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CCDC163A0A0D9SF12 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CCDC163A0A0D9SF12 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC163A0A0D9SF12 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC163A0A0D9SF12 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC163A0A0D9SF12 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC163A0A0D9SF12 AC132938.6-201ENST00000623828 1655 ntBASIC17.69■□□□□ 0.42
CCDC163A0A0D9SF12 ELK2BP-201ENST00000415014 1224 ntBASIC17.69■□□□□ 0.42
CCDC163A0A0D9SF12 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
CCDC163A0A0D9SF12 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.69■□□□□ 0.42
CCDC163A0A0D9SF12 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC163A0A0D9SF12 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC163A0A0D9SF12 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC163A0A0D9SF12 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.69■□□□□ 0.42
CCDC163A0A0D9SF12 MIR4751-201ENST00000578027 74 ntBASIC17.69■□□□□ 0.42
CCDC163A0A0D9SF12 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC163A0A0D9SF12 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC163A0A0D9SF12 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC163A0A0D9SF12 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC163A0A0D9SF12 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CCDC163A0A0D9SF12 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC163A0A0D9SF12 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC163A0A0D9SF12 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC163A0A0D9SF12 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC163A0A0D9SF12 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC163A0A0D9SF12 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC163A0A0D9SF12 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC163A0A0D9SF12 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC163A0A0D9SF12 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.68■□□□□ 0.42
CCDC163A0A0D9SF12 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC163A0A0D9SF12 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.68■□□□□ 0.42
CCDC163A0A0D9SF12 FAM8A3P-201ENST00000427218 844 ntBASIC17.68■□□□□ 0.42
CCDC163A0A0D9SF12 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.68■□□□□ 0.42
CCDC163A0A0D9SF12 ACTG1P14-201ENST00000446382 1122 ntBASIC17.68■□□□□ 0.42
CCDC163A0A0D9SF12 RPS15P9-201ENST00000494093 319 ntBASIC17.68■□□□□ 0.42
CCDC163A0A0D9SF12 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC163A0A0D9SF12 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.68■□□□□ 0.42
CCDC163A0A0D9SF12 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.68■□□□□ 0.42
CCDC163A0A0D9SF12 AC006504.4-201ENST00000592118 1568 ntBASIC17.68■□□□□ 0.42
CCDC163A0A0D9SF12 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms