Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC187A0A096LP49 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
CCDC187A0A096LP49 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC187A0A096LP49 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
CCDC187A0A096LP49 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC187A0A096LP49 GMCL1P1-201ENST00000463439 1581 ntBASIC16.98■□□□□ 0.31
CCDC187A0A096LP49 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC187A0A096LP49 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC187A0A096LP49 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CCDC187A0A096LP49 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC187A0A096LP49 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC187A0A096LP49 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CCDC187A0A096LP49 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC187A0A096LP49 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC187A0A096LP49 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC187A0A096LP49 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
CCDC187A0A096LP49 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC187A0A096LP49 AC087289.5-201ENST00000586076 3175 ntBASIC16.97■□□□□ 0.31
CCDC187A0A096LP49 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC187A0A096LP49 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC187A0A096LP49 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC187A0A096LP49 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC187A0A096LP49 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC187A0A096LP49 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC187A0A096LP49 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC187A0A096LP49 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CCDC187A0A096LP49 PMS2P2-201ENST00000425039 1128 ntBASIC16.97■□□□□ 0.31
CCDC187A0A096LP49 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC187A0A096LP49 AC122714.2-201ENST00000502787 707 ntBASIC16.97■□□□□ 0.31
CCDC187A0A096LP49 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.97■□□□□ 0.31
CCDC187A0A096LP49 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC187A0A096LP49 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.97■□□□□ 0.31
CCDC187A0A096LP49 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC187A0A096LP49 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC187A0A096LP49 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC187A0A096LP49 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC187A0A096LP49 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
CCDC187A0A096LP49 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC187A0A096LP49 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC187A0A096LP49 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC187A0A096LP49 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC187A0A096LP49 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC187A0A096LP49 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC187A0A096LP49 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC187A0A096LP49 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC187A0A096LP49 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC187A0A096LP49 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC187A0A096LP49 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC187A0A096LP49 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC187A0A096LP49 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC187A0A096LP49 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CCDC187A0A096LP49 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC187A0A096LP49 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
CCDC187A0A096LP49 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CCDC187A0A096LP49 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC187A0A096LP49 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.96■□□□□ 0.31
CCDC187A0A096LP49 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC187A0A096LP49 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC187A0A096LP49 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CCDC187A0A096LP49 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.96■□□□□ 0.31
CCDC187A0A096LP49 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC187A0A096LP49 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC187A0A096LP49 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CCDC187A0A096LP49 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.96■□□□□ 0.31
CCDC187A0A096LP49 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.96■□□□□ 0.31
CCDC187A0A096LP49 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.96■□□□□ 0.31
CCDC187A0A096LP49 AC073592.4-201ENST00000623827 446 ntBASIC16.96■□□□□ 0.31
CCDC187A0A096LP49 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC187A0A096LP49 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC187A0A096LP49 PMPCAP1-201ENST00000508114 1576 ntBASIC16.96■□□□□ 0.31
CCDC187A0A096LP49 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC187A0A096LP49 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC187A0A096LP49 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CCDC187A0A096LP49 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC187A0A096LP49 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC187A0A096LP49 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC187A0A096LP49 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC187A0A096LP49 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.96■□□□□ 0.3
CCDC187A0A096LP49 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC187A0A096LP49 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC187A0A096LP49 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC187A0A096LP49 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC187A0A096LP49 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC187A0A096LP49 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC187A0A096LP49 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC187A0A096LP49 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC187A0A096LP49 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CCDC187A0A096LP49 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC187A0A096LP49 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.95■□□□□ 0.3
CCDC187A0A096LP49 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC187A0A096LP49 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.95■□□□□ 0.3
CCDC187A0A096LP49 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CCDC187A0A096LP49 AC096633.1-201ENST00000422446 749 ntBASIC16.95■□□□□ 0.3
CCDC187A0A096LP49 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.95■□□□□ 0.3
CCDC187A0A096LP49 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.95■□□□□ 0.3
CCDC187A0A096LP49 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.95■□□□□ 0.3
CCDC187A0A096LP49 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC187A0A096LP49 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC187A0A096LP49 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.95■□□□□ 0.3
CCDC187A0A096LP49 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms