Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV30A0A087WSZ9 CD276-203ENST00000537340 2439 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 KRT18P55-202ENST00000578578 1546 ntBASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 AC008894.3-201ENST00000624324 3103 ntBASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 GPX4-207ENST00000589115 812 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 AC010240.3-201ENST00000607688 395 ntBASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 SNX21-213ENST00000614929 587 ntTSL 5 BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TRAV30A0A087WSZ9 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 AP000523.1-201ENST00000398242 1049 ntBASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 ETFA-216ENST00000560726 942 ntTSL 3 BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV30A0A087WSZ9 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms