Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC20.22■□□□□ 0.83
PTCH2Q9Y6C5 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.22■□□□□ 0.83
PTCH2Q9Y6C5 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
PTCH2Q9Y6C5 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
PTCH2Q9Y6C5 AD001527.2-201ENST00000622994 785 ntBASIC20.22■□□□□ 0.83
PTCH2Q9Y6C5 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PTCH2Q9Y6C5 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PTCH2Q9Y6C5 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.22■□□□□ 0.83
PTCH2Q9Y6C5 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTCH2Q9Y6C5 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
PTCH2Q9Y6C5 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTCH2Q9Y6C5 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTCH2Q9Y6C5 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
PTCH2Q9Y6C5 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.21■□□□□ 0.83
PTCH2Q9Y6C5 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTCH2Q9Y6C5 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTCH2Q9Y6C5 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.21■□□□□ 0.83
PTCH2Q9Y6C5 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTCH2Q9Y6C5 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC20.21■□□□□ 0.83
PTCH2Q9Y6C5 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PTCH2Q9Y6C5 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTCH2Q9Y6C5 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC20.21■□□□□ 0.83
PTCH2Q9Y6C5 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.21■□□□□ 0.83
PTCH2Q9Y6C5 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
PTCH2Q9Y6C5 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
PTCH2Q9Y6C5 AF228730.6-201ENST00000641497 218 ntBASIC20.21■□□□□ 0.83
PTCH2Q9Y6C5 AC084121.3-201ENST00000641716 218 ntBASIC20.21■□□□□ 0.83
PTCH2Q9Y6C5 AC105233.6-201ENST00000642093 218 ntBASIC20.21■□□□□ 0.83
PTCH2Q9Y6C5 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTCH2Q9Y6C5 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.21■□□□□ 0.83
PTCH2Q9Y6C5 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTCH2Q9Y6C5 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.21■□□□□ 0.83
PTCH2Q9Y6C5 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTCH2Q9Y6C5 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTCH2Q9Y6C5 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PTCH2Q9Y6C5 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTCH2Q9Y6C5 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTCH2Q9Y6C5 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PTCH2Q9Y6C5 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTCH2Q9Y6C5 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.2■□□□□ 0.82
PTCH2Q9Y6C5 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTCH2Q9Y6C5 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTCH2Q9Y6C5 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.2■□□□□ 0.82
PTCH2Q9Y6C5 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC20.2■□□□□ 0.82
PTCH2Q9Y6C5 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTCH2Q9Y6C5 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTCH2Q9Y6C5 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC20.2■□□□□ 0.82
PTCH2Q9Y6C5 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.2■□□□□ 0.82
PTCH2Q9Y6C5 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.2■□□□□ 0.82
PTCH2Q9Y6C5 AC008667.4-201ENST00000607370 168 ntBASIC20.2■□□□□ 0.82
PTCH2Q9Y6C5 AC004877.2-201ENST00000623941 599 ntBASIC20.2■□□□□ 0.82
PTCH2Q9Y6C5 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PTCH2Q9Y6C5 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.2■□□□□ 0.82
PTCH2Q9Y6C5 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTCH2Q9Y6C5 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
PTCH2Q9Y6C5 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTCH2Q9Y6C5 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PTCH2Q9Y6C5 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTCH2Q9Y6C5 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
PTCH2Q9Y6C5 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTCH2Q9Y6C5 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTCH2Q9Y6C5 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTCH2Q9Y6C5 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.19■□□□□ 0.82
PTCH2Q9Y6C5 RPS15P9-201ENST00000494093 319 ntBASIC20.19■□□□□ 0.82
PTCH2Q9Y6C5 AC069262.1-201ENST00000539058 672 ntBASIC20.19■□□□□ 0.82
PTCH2Q9Y6C5 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PTCH2Q9Y6C5 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC20.19■□□□□ 0.82
PTCH2Q9Y6C5 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.19■□□□□ 0.82
PTCH2Q9Y6C5 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC20.19■□□□□ 0.82
PTCH2Q9Y6C5 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PTCH2Q9Y6C5 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.19■□□□□ 0.82
PTCH2Q9Y6C5 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PTCH2Q9Y6C5 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTCH2Q9Y6C5 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.19■□□□□ 0.82
PTCH2Q9Y6C5 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.19■□□□□ 0.82
PTCH2Q9Y6C5 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTCH2Q9Y6C5 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
PTCH2Q9Y6C5 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTCH2Q9Y6C5 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTCH2Q9Y6C5 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PTCH2Q9Y6C5 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
PTCH2Q9Y6C5 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTCH2Q9Y6C5 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PTCH2Q9Y6C5 MYLKP1-201ENST00000509077 1580 ntBASIC20.18■□□□□ 0.82
PTCH2Q9Y6C5 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.18■□□□□ 0.82
PTCH2Q9Y6C5 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.18■□□□□ 0.82
PTCH2Q9Y6C5 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTCH2Q9Y6C5 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PTCH2Q9Y6C5 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTCH2Q9Y6C5 HLA-DRB6-201ENST00000411500 1235 ntBASIC20.18■□□□□ 0.82
PTCH2Q9Y6C5 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
PTCH2Q9Y6C5 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC20.18■□□□□ 0.82
PTCH2Q9Y6C5 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC20.18■□□□□ 0.82
PTCH2Q9Y6C5 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.18■□□□□ 0.82
PTCH2Q9Y6C5 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.18■□□□□ 0.82
PTCH2Q9Y6C5 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC20.18■□□□□ 0.82
PTCH2Q9Y6C5 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PTCH2Q9Y6C5 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC20.18■□□□□ 0.82
PTCH2Q9Y6C5 AC004835.2-201ENST00000603762 682 ntBASIC20.18■□□□□ 0.82
PTCH2Q9Y6C5 AC010507.1-201ENST00000633895 436 ntBASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms