Protein–RNA interactions for Protein: Q9UBT3

DKK4, Dickkopf-related protein 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK4Q9UBT3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
DKK4Q9UBT3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.67■□□□□ 0.26
DKK4Q9UBT3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.67■□□□□ 0.26
DKK4Q9UBT3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DKK4Q9UBT3 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DKK4Q9UBT3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DKK4Q9UBT3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DKK4Q9UBT3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
DKK4Q9UBT3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DKK4Q9UBT3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
DKK4Q9UBT3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.66■□□□□ 0.26
DKK4Q9UBT3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.66■□□□□ 0.26
DKK4Q9UBT3 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.66■□□□□ 0.26
DKK4Q9UBT3 GAPDHP21-201ENST00000450301 1010 ntBASIC16.66■□□□□ 0.26
DKK4Q9UBT3 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.66■□□□□ 0.26
DKK4Q9UBT3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DKK4Q9UBT3 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.66■□□□□ 0.26
DKK4Q9UBT3 MYLKP1-201ENST00000509077 1580 ntBASIC16.66■□□□□ 0.26
DKK4Q9UBT3 AC109322.1-201ENST00000524499 1264 ntBASIC16.66■□□□□ 0.26
DKK4Q9UBT3 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DKK4Q9UBT3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.66■□□□□ 0.26
DKK4Q9UBT3 REXO1L3P-201ENST00000622202 1288 ntBASIC16.66■□□□□ 0.26
DKK4Q9UBT3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.66■□□□□ 0.26
DKK4Q9UBT3 LINC00628-201ENST00000628516 1289 ntBASIC16.66■□□□□ 0.26
DKK4Q9UBT3 AC007064.4-201ENST00000637740 555 ntBASIC16.66■□□□□ 0.26
DKK4Q9UBT3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
DKK4Q9UBT3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
DKK4Q9UBT3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
DKK4Q9UBT3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DKK4Q9UBT3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.66■□□□□ 0.26
DKK4Q9UBT3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
DKK4Q9UBT3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
DKK4Q9UBT3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
DKK4Q9UBT3 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.66■□□□□ 0.26
DKK4Q9UBT3 AFG3L1P-217ENST00000557444 2447 ntBASIC16.66■□□□□ 0.26
DKK4Q9UBT3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.66■□□□□ 0.26
DKK4Q9UBT3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DKK4Q9UBT3 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
DKK4Q9UBT3 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DKK4Q9UBT3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DKK4Q9UBT3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
DKK4Q9UBT3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DKK4Q9UBT3 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DKK4Q9UBT3 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DKK4Q9UBT3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
DKK4Q9UBT3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DKK4Q9UBT3 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
DKK4Q9UBT3 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.65■□□□□ 0.26
DKK4Q9UBT3 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.65■□□□□ 0.26
DKK4Q9UBT3 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.65■□□□□ 0.26
DKK4Q9UBT3 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.65■□□□□ 0.26
DKK4Q9UBT3 AC073592.5-201ENST00000624854 528 ntBASIC16.65■□□□□ 0.26
DKK4Q9UBT3 AC092902.6-201ENST00000641783 218 ntBASIC16.65■□□□□ 0.26
DKK4Q9UBT3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DKK4Q9UBT3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DKK4Q9UBT3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
DKK4Q9UBT3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
DKK4Q9UBT3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DKK4Q9UBT3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
DKK4Q9UBT3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
DKK4Q9UBT3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.64■□□□□ 0.26
DKK4Q9UBT3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
DKK4Q9UBT3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
DKK4Q9UBT3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.64■□□□□ 0.25
DKK4Q9UBT3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
DKK4Q9UBT3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC16.64■□□□□ 0.25
DKK4Q9UBT3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
DKK4Q9UBT3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DKK4Q9UBT3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.64■□□□□ 0.25
DKK4Q9UBT3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
DKK4Q9UBT3 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.64■□□□□ 0.25
DKK4Q9UBT3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DKK4Q9UBT3 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
DKK4Q9UBT3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
DKK4Q9UBT3 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.64■□□□□ 0.25
DKK4Q9UBT3 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
DKK4Q9UBT3 TERF1P3-201ENST00000505638 1227 ntBASIC16.64■□□□□ 0.25
DKK4Q9UBT3 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.64■□□□□ 0.25
DKK4Q9UBT3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DKK4Q9UBT3 AC022145.2-201ENST00000598203 171 ntBASIC16.64■□□□□ 0.25
DKK4Q9UBT3 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.64■□□□□ 0.25
DKK4Q9UBT3 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.64■□□□□ 0.25
DKK4Q9UBT3 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.64■□□□□ 0.25
DKK4Q9UBT3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.64■□□□□ 0.25
DKK4Q9UBT3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DKK4Q9UBT3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
DKK4Q9UBT3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
DKK4Q9UBT3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
DKK4Q9UBT3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DKK4Q9UBT3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.64■□□□□ 0.25
DKK4Q9UBT3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
DKK4Q9UBT3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.63■□□□□ 0.25
DKK4Q9UBT3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DKK4Q9UBT3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.63■□□□□ 0.25
DKK4Q9UBT3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.63■□□□□ 0.25
DKK4Q9UBT3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
DKK4Q9UBT3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DKK4Q9UBT3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
DKK4Q9UBT3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.63■□□□□ 0.25
DKK4Q9UBT3 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms