Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
CUEDC1Q9NWM3 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CUEDC1Q9NWM3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CUEDC1Q9NWM3 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CUEDC1Q9NWM3 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CUEDC1Q9NWM3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CUEDC1Q9NWM3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 AL353692.3-201ENST00000407031 1396 ntBASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 AP000997.3-201ENST00000623333 2250 ntBASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 AC011498.5-201ENST00000592027 486 ntBASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CUEDC1Q9NWM3 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CUEDC1Q9NWM3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CUEDC1Q9NWM3 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.4■□□□□ 0.38
CUEDC1Q9NWM3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CUEDC1Q9NWM3 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CUEDC1Q9NWM3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CUEDC1Q9NWM3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.4■□□□□ 0.38
CUEDC1Q9NWM3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CUEDC1Q9NWM3 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.4■□□□□ 0.38
CUEDC1Q9NWM3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CUEDC1Q9NWM3 AC018470.1-201ENST00000624790 3129 ntBASIC17.4■□□□□ 0.38
CUEDC1Q9NWM3 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CUEDC1Q9NWM3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CUEDC1Q9NWM3 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CUEDC1Q9NWM3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.4■□□□□ 0.38
CUEDC1Q9NWM3 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CUEDC1Q9NWM3 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CUEDC1Q9NWM3 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CUEDC1Q9NWM3 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.4■□□□□ 0.38
CUEDC1Q9NWM3 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CUEDC1Q9NWM3 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.4■□□□□ 0.38
CUEDC1Q9NWM3 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.4■□□□□ 0.38
CUEDC1Q9NWM3 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.4■□□□□ 0.38
CUEDC1Q9NWM3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.4■□□□□ 0.38
CUEDC1Q9NWM3 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.4■□□□□ 0.38
CUEDC1Q9NWM3 GPALPP1-207ENST00000611650 899 ntBASIC17.4■□□□□ 0.38
CUEDC1Q9NWM3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.4■□□□□ 0.38
CUEDC1Q9NWM3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.4■□□□□ 0.38
CUEDC1Q9NWM3 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CUEDC1Q9NWM3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CUEDC1Q9NWM3 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CUEDC1Q9NWM3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.39■□□□□ 0.38
CUEDC1Q9NWM3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.38
CUEDC1Q9NWM3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
CUEDC1Q9NWM3 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
CUEDC1Q9NWM3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CUEDC1Q9NWM3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CUEDC1Q9NWM3 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
CUEDC1Q9NWM3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CUEDC1Q9NWM3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.39■□□□□ 0.37
CUEDC1Q9NWM3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CUEDC1Q9NWM3 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CUEDC1Q9NWM3 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CUEDC1Q9NWM3 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CUEDC1Q9NWM3 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CUEDC1Q9NWM3 TSPY22P-201ENST00000427496 604 ntBASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms