Protein–RNA interactions for Protein: Q9NP91

SLC6A20, Sodium- and chloride-dependent transporter XTRP3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20Q9NP91 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
SLC6A20Q9NP91 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A20Q9NP91 AC012313.10-201ENST00000623509 926 ntBASIC17.28■□□□□ 0.36
SLC6A20Q9NP91 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A20Q9NP91 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A20Q9NP91 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A20Q9NP91 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.28■□□□□ 0.36
SLC6A20Q9NP91 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SLC6A20Q9NP91 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A20Q9NP91 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.28■□□□□ 0.36
SLC6A20Q9NP91 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A20Q9NP91 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A20Q9NP91 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A20Q9NP91 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A20Q9NP91 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SLC6A20Q9NP91 AC020763.4-201ENST00000623414 4170 ntBASIC17.28■□□□□ 0.36
SLC6A20Q9NP91 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.28■□□□□ 0.36
SLC6A20Q9NP91 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.28■□□□□ 0.36
SLC6A20Q9NP91 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.28■□□□□ 0.36
SLC6A20Q9NP91 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SLC6A20Q9NP91 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC6A20Q9NP91 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC6A20Q9NP91 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLC6A20Q9NP91 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC6A20Q9NP91 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLC6A20Q9NP91 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC6A20Q9NP91 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC6A20Q9NP91 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLC6A20Q9NP91 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SLC6A20Q9NP91 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.27■□□□□ 0.36
SLC6A20Q9NP91 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC6A20Q9NP91 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC6A20Q9NP91 AC112698.1-201ENST00000510299 916 ntBASIC17.27■□□□□ 0.36
SLC6A20Q9NP91 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.27■□□□□ 0.36
SLC6A20Q9NP91 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
SLC6A20Q9NP91 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
SLC6A20Q9NP91 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLC6A20Q9NP91 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SLC6A20Q9NP91 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
SLC6A20Q9NP91 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.27■□□□□ 0.35
SLC6A20Q9NP91 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
SLC6A20Q9NP91 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
SLC6A20Q9NP91 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.27■□□□□ 0.35
SLC6A20Q9NP91 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC6A20Q9NP91 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC6A20Q9NP91 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC6A20Q9NP91 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC6A20Q9NP91 KRT8P47-201ENST00000604727 1398 ntBASIC17.27■□□□□ 0.35
SLC6A20Q9NP91 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
SLC6A20Q9NP91 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
SLC6A20Q9NP91 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 AC100803.2-201ENST00000562459 1963 ntBASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 LINC00265-3P-201ENST00000447588 903 ntBASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 TOB2P1-201ENST00000469761 992 ntBASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 AC092329.2-201ENST00000598402 547 ntBASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 AL353801.3-201ENST00000609898 542 ntBASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC6A20Q9NP91 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC6A20Q9NP91 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC6A20Q9NP91 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC6A20Q9NP91 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SLC6A20Q9NP91 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms