Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CSNK1G1Q9HCP0 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.77■□□□□ 0.6
CSNK1G1Q9HCP0 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CSNK1G1Q9HCP0 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.77■□□□□ 0.59
CSNK1G1Q9HCP0 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
CSNK1G1Q9HCP0 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CSNK1G1Q9HCP0 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.77■□□□□ 0.59
CSNK1G1Q9HCP0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CSNK1G1Q9HCP0 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CSNK1G1Q9HCP0 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CSNK1G1Q9HCP0 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CSNK1G1Q9HCP0 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.76■□□□□ 0.59
CSNK1G1Q9HCP0 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSNK1G1Q9HCP0 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CSNK1G1Q9HCP0 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.76■□□□□ 0.59
CSNK1G1Q9HCP0 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSNK1G1Q9HCP0 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSNK1G1Q9HCP0 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSNK1G1Q9HCP0 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSNK1G1Q9HCP0 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSNK1G1Q9HCP0 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSNK1G1Q9HCP0 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CSNK1G1Q9HCP0 FAM220CP-201ENST00000395253 831 ntBASIC18.76■□□□□ 0.59
CSNK1G1Q9HCP0 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.76■□□□□ 0.59
CSNK1G1Q9HCP0 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.76■□□□□ 0.59
CSNK1G1Q9HCP0 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.76■□□□□ 0.59
CSNK1G1Q9HCP0 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.76■□□□□ 0.59
CSNK1G1Q9HCP0 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSNK1G1Q9HCP0 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.76■□□□□ 0.59
CSNK1G1Q9HCP0 LINC01711-201ENST00000598340 967 ntBASIC18.76■□□□□ 0.59
CSNK1G1Q9HCP0 REXO1L6P-202ENST00000619970 1078 ntBASIC18.76■□□□□ 0.59
CSNK1G1Q9HCP0 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.76■□□□□ 0.59
CSNK1G1Q9HCP0 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CSNK1G1Q9HCP0 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSNK1G1Q9HCP0 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSNK1G1Q9HCP0 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSNK1G1Q9HCP0 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSNK1G1Q9HCP0 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSNK1G1Q9HCP0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSNK1G1Q9HCP0 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CSNK1G1Q9HCP0 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CSNK1G1Q9HCP0 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSNK1G1Q9HCP0 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CSNK1G1Q9HCP0 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSNK1G1Q9HCP0 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
CSNK1G1Q9HCP0 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSNK1G1Q9HCP0 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSNK1G1Q9HCP0 AKR1C7P-201ENST00000305623 895 ntBASIC18.75■□□□□ 0.59
CSNK1G1Q9HCP0 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSNK1G1Q9HCP0 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.75■□□□□ 0.59
CSNK1G1Q9HCP0 COX5BP2-201ENST00000392354 334 ntBASIC18.75■□□□□ 0.59
CSNK1G1Q9HCP0 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSNK1G1Q9HCP0 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CSNK1G1Q9HCP0 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.75■□□□□ 0.59
CSNK1G1Q9HCP0 TPM4P1-201ENST00000436100 807 ntBASIC18.75■□□□□ 0.59
CSNK1G1Q9HCP0 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.75■□□□□ 0.59
CSNK1G1Q9HCP0 DDX43P3-201ENST00000441064 443 ntBASIC18.75■□□□□ 0.59
CSNK1G1Q9HCP0 AC122714.2-201ENST00000502787 707 ntBASIC18.75■□□□□ 0.59
CSNK1G1Q9HCP0 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.75■□□□□ 0.59
CSNK1G1Q9HCP0 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
CSNK1G1Q9HCP0 AC116407.2-201ENST00000613639 860 ntBASIC18.75■□□□□ 0.59
CSNK1G1Q9HCP0 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.75■□□□□ 0.59
CSNK1G1Q9HCP0 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CSNK1G1Q9HCP0 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.75■□□□□ 0.59
CSNK1G1Q9HCP0 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSNK1G1Q9HCP0 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.75■□□□□ 0.59
CSNK1G1Q9HCP0 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
CSNK1G1Q9HCP0 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSNK1G1Q9HCP0 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSNK1G1Q9HCP0 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.74■□□□□ 0.59
CSNK1G1Q9HCP0 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CSNK1G1Q9HCP0 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.74■□□□□ 0.59
CSNK1G1Q9HCP0 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSNK1G1Q9HCP0 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSNK1G1Q9HCP0 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CSNK1G1Q9HCP0 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CSNK1G1Q9HCP0 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.74■□□□□ 0.59
CSNK1G1Q9HCP0 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CSNK1G1Q9HCP0 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.74■□□□□ 0.59
CSNK1G1Q9HCP0 FAAHP1-202ENST00000446499 1238 ntBASIC18.74■□□□□ 0.59
CSNK1G1Q9HCP0 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSNK1G1Q9HCP0 EMBP1-201ENST00000458200 901 ntBASIC18.74■□□□□ 0.59
CSNK1G1Q9HCP0 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.74■□□□□ 0.59
CSNK1G1Q9HCP0 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CSNK1G1Q9HCP0 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.74■□□□□ 0.59
CSNK1G1Q9HCP0 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.74■□□□□ 0.59
CSNK1G1Q9HCP0 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.74■□□□□ 0.59
CSNK1G1Q9HCP0 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.74■□□□□ 0.59
CSNK1G1Q9HCP0 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.74■□□□□ 0.59
CSNK1G1Q9HCP0 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSNK1G1Q9HCP0 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.74■□□□□ 0.59
CSNK1G1Q9HCP0 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.74■□□□□ 0.59
CSNK1G1Q9HCP0 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CSNK1G1Q9HCP0 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CSNK1G1Q9HCP0 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CSNK1G1Q9HCP0 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSNK1G1Q9HCP0 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CSNK1G1Q9HCP0 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CSNK1G1Q9HCP0 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CSNK1G1Q9HCP0 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms