Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SP110Q9HB58 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SP110Q9HB58 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SP110Q9HB58 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.45■□□□□ 0.54
SP110Q9HB58 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SP110Q9HB58 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SP110Q9HB58 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SP110Q9HB58 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.45■□□□□ 0.54
SP110Q9HB58 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SP110Q9HB58 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.44■□□□□ 0.54
SP110Q9HB58 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SP110Q9HB58 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SP110Q9HB58 AC138028.4-201ENST00000564984 1845 ntBASIC18.44■□□□□ 0.54
SP110Q9HB58 FLJ13224-201ENST00000313737 1514 ntBASIC18.44■□□□□ 0.54
SP110Q9HB58 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SP110Q9HB58 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
SP110Q9HB58 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SP110Q9HB58 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.44■□□□□ 0.54
SP110Q9HB58 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.44■□□□□ 0.54
SP110Q9HB58 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SP110Q9HB58 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SP110Q9HB58 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SP110Q9HB58 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.44■□□□□ 0.54
SP110Q9HB58 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SP110Q9HB58 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SP110Q9HB58 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SP110Q9HB58 KRT18P65-201ENST00000439811 1286 ntBASIC18.44■□□□□ 0.54
SP110Q9HB58 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.44■□□□□ 0.54
SP110Q9HB58 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.44■□□□□ 0.54
SP110Q9HB58 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.44■□□□□ 0.54
SP110Q9HB58 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.44■□□□□ 0.54
SP110Q9HB58 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SP110Q9HB58 AP000550.4-202ENST00000639755 178 ntBASIC18.44■□□□□ 0.54
SP110Q9HB58 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SP110Q9HB58 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SP110Q9HB58 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SP110Q9HB58 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SP110Q9HB58 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SP110Q9HB58 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
SP110Q9HB58 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.44■□□□□ 0.54
SP110Q9HB58 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SP110Q9HB58 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SP110Q9HB58 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SP110Q9HB58 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SP110Q9HB58 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.43■□□□□ 0.54
SP110Q9HB58 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SP110Q9HB58 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SP110Q9HB58 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SP110Q9HB58 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SP110Q9HB58 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.43■□□□□ 0.54
SP110Q9HB58 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SP110Q9HB58 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.43■□□□□ 0.54
SP110Q9HB58 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SP110Q9HB58 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SP110Q9HB58 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SP110Q9HB58 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.43■□□□□ 0.54
SP110Q9HB58 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SP110Q9HB58 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.43■□□□□ 0.54
SP110Q9HB58 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.43■□□□□ 0.54
SP110Q9HB58 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
SP110Q9HB58 AC007613.1-201ENST00000572811 2597 ntBASIC18.43■□□□□ 0.54
SP110Q9HB58 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SP110Q9HB58 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.43■□□□□ 0.54
SP110Q9HB58 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
SP110Q9HB58 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SP110Q9HB58 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.43■□□□□ 0.54
SP110Q9HB58 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SP110Q9HB58 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SP110Q9HB58 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SP110Q9HB58 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
SP110Q9HB58 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SP110Q9HB58 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
SP110Q9HB58 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SP110Q9HB58 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.42■□□□□ 0.54
SP110Q9HB58 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.42■□□□□ 0.54
SP110Q9HB58 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SP110Q9HB58 AP000997.3-201ENST00000623333 2250 ntBASIC18.42■□□□□ 0.54
SP110Q9HB58 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SP110Q9HB58 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SP110Q9HB58 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SP110Q9HB58 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SP110Q9HB58 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SP110Q9HB58 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SP110Q9HB58 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SP110Q9HB58 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SP110Q9HB58 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SP110Q9HB58 BX276092.5-203ENST00000456199 560 ntBASIC18.42■□□□□ 0.54
SP110Q9HB58 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.42■□□□□ 0.54
SP110Q9HB58 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SP110Q9HB58 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SP110Q9HB58 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.42■□□□□ 0.54
SP110Q9HB58 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.42■□□□□ 0.54
SP110Q9HB58 KRT8P26-201ENST00000534154 1276 ntBASIC18.42■□□□□ 0.54
SP110Q9HB58 AL121672.3-201ENST00000608644 468 ntBASIC18.42■□□□□ 0.54
SP110Q9HB58 AC091076.1-201ENST00000610741 619 ntBASIC18.42■□□□□ 0.54
SP110Q9HB58 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SP110Q9HB58 AC009154.2-201ENST00000621177 724 ntBASIC18.42■□□□□ 0.54
SP110Q9HB58 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SP110Q9HB58 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SP110Q9HB58 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms