Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 ARHGAP23P1-201ENST00000562773 1937 ntBASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CYSTM1Q9H1C7 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
CYSTM1Q9H1C7 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CYSTM1Q9H1C7 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC10.4□□□□□ -0.74
CYSTM1Q9H1C7 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
CYSTM1Q9H1C7 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
CYSTM1Q9H1C7 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC10.4□□□□□ -0.74
CYSTM1Q9H1C7 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC10.4□□□□□ -0.74
CYSTM1Q9H1C7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC10.4□□□□□ -0.74
CYSTM1Q9H1C7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC10.4□□□□□ -0.74
CYSTM1Q9H1C7 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CYSTM1Q9H1C7 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
CYSTM1Q9H1C7 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CYSTM1Q9H1C7 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
CYSTM1Q9H1C7 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CYSTM1Q9H1C7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CYSTM1Q9H1C7 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
CYSTM1Q9H1C7 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
CYSTM1Q9H1C7 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
CYSTM1Q9H1C7 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC10.4□□□□□ -0.74
CYSTM1Q9H1C7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CYSTM1Q9H1C7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC10.4□□□□□ -0.74
CYSTM1Q9H1C7 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CYSTM1Q9H1C7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC10.4□□□□□ -0.74
CYSTM1Q9H1C7 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
CYSTM1Q9H1C7 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CYSTM1Q9H1C7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CYSTM1Q9H1C7 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CYSTM1Q9H1C7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CYSTM1Q9H1C7 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC10.4□□□□□ -0.74
CYSTM1Q9H1C7 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC10.4□□□□□ -0.74
CYSTM1Q9H1C7 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
CYSTM1Q9H1C7 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
CYSTM1Q9H1C7 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CYSTM1Q9H1C7 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC10.4□□□□□ -0.74
CYSTM1Q9H1C7 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CYSTM1Q9H1C7 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
CYSTM1Q9H1C7 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
CYSTM1Q9H1C7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC10.4□□□□□ -0.75
CYSTM1Q9H1C7 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.75
CYSTM1Q9H1C7 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
CYSTM1Q9H1C7 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
CYSTM1Q9H1C7 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
CYSTM1Q9H1C7 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
CYSTM1Q9H1C7 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC10.4□□□□□ -0.75
CYSTM1Q9H1C7 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
CYSTM1Q9H1C7 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC10.4□□□□□ -0.75
CYSTM1Q9H1C7 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
CYSTM1Q9H1C7 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
CYSTM1Q9H1C7 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC10.39□□□□□ -0.75
CYSTM1Q9H1C7 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
CYSTM1Q9H1C7 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CYSTM1Q9H1C7 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CYSTM1Q9H1C7 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
CYSTM1Q9H1C7 CICP17-201ENST00000418553 2377 ntBASIC10.39□□□□□ -0.75
CYSTM1Q9H1C7 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CYSTM1Q9H1C7 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
CYSTM1Q9H1C7 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CYSTM1Q9H1C7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC10.39□□□□□ -0.75
CYSTM1Q9H1C7 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CYSTM1Q9H1C7 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
CYSTM1Q9H1C7 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
CYSTM1Q9H1C7 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC10.39□□□□□ -0.75
CYSTM1Q9H1C7 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
CYSTM1Q9H1C7 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
CYSTM1Q9H1C7 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
CYSTM1Q9H1C7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
CYSTM1Q9H1C7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
CYSTM1Q9H1C7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC10.39□□□□□ -0.75
CYSTM1Q9H1C7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CYSTM1Q9H1C7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC10.39□□□□□ -0.75
CYSTM1Q9H1C7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CYSTM1Q9H1C7 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CYSTM1Q9H1C7 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CYSTM1Q9H1C7 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CYSTM1Q9H1C7 CICP23-201ENST00000605013 2741 ntBASIC10.39□□□□□ -0.75
CYSTM1Q9H1C7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC10.39□□□□□ -0.75
CYSTM1Q9H1C7 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CYSTM1Q9H1C7 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
CYSTM1Q9H1C7 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
CYSTM1Q9H1C7 AL023775.1-201ENST00000454907 1746 ntBASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CYSTM1Q9H1C7 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC10.38□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms