Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.78■■□□□ 1.08
EYA3Q99504 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
EYA3Q99504 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
EYA3Q99504 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC21.78■■□□□ 1.08
EYA3Q99504 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC21.78■■□□□ 1.08
EYA3Q99504 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.78■■□□□ 1.08
EYA3Q99504 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
EYA3Q99504 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
EYA3Q99504 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
EYA3Q99504 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
EYA3Q99504 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
EYA3Q99504 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
EYA3Q99504 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EYA3Q99504 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
EYA3Q99504 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC21.77■■□□□ 1.08
EYA3Q99504 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC21.77■■□□□ 1.08
EYA3Q99504 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EYA3Q99504 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC21.77■■□□□ 1.08
EYA3Q99504 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC21.77■■□□□ 1.08
EYA3Q99504 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EYA3Q99504 ETFA-208ENST00000559602 792 ntTSL 3 BASIC21.77■■□□□ 1.08
EYA3Q99504 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC21.77■■□□□ 1.08
EYA3Q99504 SDCCAG3P1-201ENST00000589292 1150 ntBASIC21.77■■□□□ 1.08
EYA3Q99504 CYGB-205ENST00000590175 830 ntTSL 3 BASIC21.77■■□□□ 1.08
EYA3Q99504 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC21.77■■□□□ 1.08
EYA3Q99504 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC21.77■■□□□ 1.08
EYA3Q99504 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC21.77■■□□□ 1.08
EYA3Q99504 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC21.77■■□□□ 1.08
EYA3Q99504 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
EYA3Q99504 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EYA3Q99504 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
EYA3Q99504 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC21.77■■□□□ 1.08
EYA3Q99504 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
EYA3Q99504 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
EYA3Q99504 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
EYA3Q99504 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC21.77■■□□□ 1.07
EYA3Q99504 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
EYA3Q99504 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
EYA3Q99504 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
EYA3Q99504 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
EYA3Q99504 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
EYA3Q99504 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC21.76■■□□□ 1.07
EYA3Q99504 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
EYA3Q99504 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
EYA3Q99504 GGCT-205ENST00000409436 954 ntTSL 3 BASIC21.76■■□□□ 1.07
EYA3Q99504 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC21.76■■□□□ 1.07
EYA3Q99504 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC21.76■■□□□ 1.07
EYA3Q99504 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
EYA3Q99504 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
EYA3Q99504 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC21.76■■□□□ 1.07
EYA3Q99504 SIGLEC16-201ENST00000599858 1437 ntBASIC21.76■■□□□ 1.07
EYA3Q99504 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
EYA3Q99504 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
EYA3Q99504 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
EYA3Q99504 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC21.76■■□□□ 1.07
EYA3Q99504 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
EYA3Q99504 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
EYA3Q99504 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.75■■□□□ 1.07
EYA3Q99504 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EYA3Q99504 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
EYA3Q99504 AC010460.3-201ENST00000511359 1579 ntBASIC21.75■■□□□ 1.07
EYA3Q99504 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
EYA3Q99504 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC21.75■■□□□ 1.07
EYA3Q99504 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC21.75■■□□□ 1.07
EYA3Q99504 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EYA3Q99504 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
EYA3Q99504 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EYA3Q99504 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EYA3Q99504 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
EYA3Q99504 SLC4A1APP2-201ENST00000424054 1259 ntBASIC21.75■■□□□ 1.07
EYA3Q99504 RPS8P6-201ENST00000426177 609 ntBASIC21.75■■□□□ 1.07
EYA3Q99504 AC103564.2-201ENST00000432853 1299 ntBASIC21.75■■□□□ 1.07
EYA3Q99504 URGCP-206ENST00000446958 365 ntTSL 2 BASIC21.75■■□□□ 1.07
EYA3Q99504 AC004967.1-201ENST00000453589 447 ntBASIC21.75■■□□□ 1.07
EYA3Q99504 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
EYA3Q99504 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC21.75■■□□□ 1.07
EYA3Q99504 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.75■■□□□ 1.07
EYA3Q99504 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC21.75■■□□□ 1.07
EYA3Q99504 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC21.75■■□□□ 1.07
EYA3Q99504 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
EYA3Q99504 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
EYA3Q99504 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.75■■□□□ 1.07
EYA3Q99504 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC21.75■■□□□ 1.07
EYA3Q99504 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
EYA3Q99504 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
EYA3Q99504 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
EYA3Q99504 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EYA3Q99504 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC21.74■■□□□ 1.07
EYA3Q99504 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
EYA3Q99504 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC21.74■■□□□ 1.07
EYA3Q99504 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
EYA3Q99504 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC21.74■■□□□ 1.07
EYA3Q99504 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC21.74■■□□□ 1.07
EYA3Q99504 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
EYA3Q99504 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
EYA3Q99504 MTDHP5-201ENST00000598980 586 ntBASIC21.74■■□□□ 1.07
EYA3Q99504 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.74■■□□□ 1.07
EYA3Q99504 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
EYA3Q99504 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
EYA3Q99504 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms