Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CALR3Q96L12 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CALR3Q96L12 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.05■□□□□ 0.64
CALR3Q96L12 SEC1P-202ENST00000473944 940 ntBASIC19.05■□□□□ 0.64
CALR3Q96L12 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.05■□□□□ 0.64
CALR3Q96L12 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CALR3Q96L12 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.05■□□□□ 0.64
CALR3Q96L12 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.05■□□□□ 0.64
CALR3Q96L12 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.05■□□□□ 0.64
CALR3Q96L12 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
CALR3Q96L12 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CALR3Q96L12 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.05■□□□□ 0.64
CALR3Q96L12 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CALR3Q96L12 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.05■□□□□ 0.64
CALR3Q96L12 PCDHA12-202ENST00000613593 2588 ntBASIC19.05■□□□□ 0.64
CALR3Q96L12 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
CALR3Q96L12 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CALR3Q96L12 AC080080.1-201ENST00000625121 2420 ntBASIC19.04■□□□□ 0.64
CALR3Q96L12 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CALR3Q96L12 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CALR3Q96L12 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CALR3Q96L12 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CALR3Q96L12 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CALR3Q96L12 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CALR3Q96L12 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.04■□□□□ 0.64
CALR3Q96L12 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.04■□□□□ 0.64
CALR3Q96L12 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.04■□□□□ 0.64
CALR3Q96L12 AC113404.2-201ENST00000507884 177 ntBASIC19.04■□□□□ 0.64
CALR3Q96L12 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.04■□□□□ 0.64
CALR3Q96L12 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.04■□□□□ 0.64
CALR3Q96L12 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.04■□□□□ 0.64
CALR3Q96L12 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CALR3Q96L12 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
CALR3Q96L12 AC092865.7-201ENST00000641832 219 ntBASIC19.04■□□□□ 0.64
CALR3Q96L12 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CALR3Q96L12 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CALR3Q96L12 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CALR3Q96L12 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CALR3Q96L12 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.04■□□□□ 0.64
CALR3Q96L12 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CALR3Q96L12 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CALR3Q96L12 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.03■□□□□ 0.64
CALR3Q96L12 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CALR3Q96L12 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CALR3Q96L12 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CALR3Q96L12 KRT17P2-201ENST00000300992 1314 ntBASIC19.03■□□□□ 0.64
CALR3Q96L12 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
CALR3Q96L12 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CALR3Q96L12 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CALR3Q96L12 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.03■□□□□ 0.64
CALR3Q96L12 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CALR3Q96L12 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CALR3Q96L12 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.03■□□□□ 0.64
CALR3Q96L12 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.03■□□□□ 0.64
CALR3Q96L12 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CALR3Q96L12 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CALR3Q96L12 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CALR3Q96L12 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CALR3Q96L12 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CALR3Q96L12 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.03■□□□□ 0.64
CALR3Q96L12 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.03■□□□□ 0.64
CALR3Q96L12 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.03■□□□□ 0.64
CALR3Q96L12 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.03■□□□□ 0.64
CALR3Q96L12 AP000525.1-201ENST00000608286 694 ntBASIC19.03■□□□□ 0.64
CALR3Q96L12 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.03■□□□□ 0.64
CALR3Q96L12 LINC01451-201ENST00000623792 534 ntBASIC19.03■□□□□ 0.64
CALR3Q96L12 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.03■□□□□ 0.64
CALR3Q96L12 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.03■□□□□ 0.64
CALR3Q96L12 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CALR3Q96L12 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.03■□□□□ 0.64
CALR3Q96L12 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CALR3Q96L12 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CALR3Q96L12 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
CALR3Q96L12 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CALR3Q96L12 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.03■□□□□ 0.64
CALR3Q96L12 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CALR3Q96L12 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
CALR3Q96L12 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.03■□□□□ 0.64
CALR3Q96L12 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
CALR3Q96L12 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CALR3Q96L12 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CALR3Q96L12 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CALR3Q96L12 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CALR3Q96L12 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CALR3Q96L12 HTR7P1-202ENST00000624664 4411 ntBASIC19.02■□□□□ 0.64
CALR3Q96L12 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CALR3Q96L12 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CALR3Q96L12 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.02■□□□□ 0.64
CALR3Q96L12 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CALR3Q96L12 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CALR3Q96L12 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CALR3Q96L12 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CALR3Q96L12 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.02■□□□□ 0.64
CALR3Q96L12 AP000523.1-201ENST00000398242 1049 ntBASIC19.02■□□□□ 0.64
CALR3Q96L12 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.02■□□□□ 0.64
CALR3Q96L12 PVRIG2P-201ENST00000435460 978 ntBASIC19.02■□□□□ 0.64
CALR3Q96L12 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CALR3Q96L12 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.02■□□□□ 0.64
CALR3Q96L12 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CALR3Q96L12 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms