Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM2Q96JY6 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM2Q96JY6 AC090340.1-201ENST00000620778 4980 ntBASIC19.9■□□□□ 0.78
PDLIM2Q96JY6 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM2Q96JY6 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM2Q96JY6 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM2Q96JY6 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM2Q96JY6 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PDLIM2Q96JY6 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.9■□□□□ 0.78
PDLIM2Q96JY6 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC19.9■□□□□ 0.78
PDLIM2Q96JY6 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDLIM2Q96JY6 AL513523.2-202ENST00000427283 2040 ntBASIC19.9■□□□□ 0.78
PDLIM2Q96JY6 AC105917.1-201ENST00000506637 2539 ntBASIC19.9■□□□□ 0.78
PDLIM2Q96JY6 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDLIM2Q96JY6 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDLIM2Q96JY6 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDLIM2Q96JY6 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDLIM2Q96JY6 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
PDLIM2Q96JY6 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDLIM2Q96JY6 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDLIM2Q96JY6 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.89■□□□□ 0.77
PDLIM2Q96JY6 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDLIM2Q96JY6 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
PDLIM2Q96JY6 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDLIM2Q96JY6 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
PDLIM2Q96JY6 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.89■□□□□ 0.77
PDLIM2Q96JY6 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.89■□□□□ 0.77
PDLIM2Q96JY6 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.89■□□□□ 0.77
PDLIM2Q96JY6 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.89■□□□□ 0.77
PDLIM2Q96JY6 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PDLIM2Q96JY6 AC091874.3-201ENST00000512672 1195 ntBASIC19.89■□□□□ 0.77
PDLIM2Q96JY6 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDLIM2Q96JY6 PNMA6B-201ENST00000538162 1200 ntBASIC19.89■□□□□ 0.77
PDLIM2Q96JY6 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.89■□□□□ 0.77
PDLIM2Q96JY6 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.89■□□□□ 0.77
PDLIM2Q96JY6 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PDLIM2Q96JY6 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.89■□□□□ 0.77
PDLIM2Q96JY6 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.89■□□□□ 0.77
PDLIM2Q96JY6 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
PDLIM2Q96JY6 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.89■□□□□ 0.77
PDLIM2Q96JY6 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDLIM2Q96JY6 RNF216P1-203ENST00000404404 2427 ntBASIC19.88■□□□□ 0.77
PDLIM2Q96JY6 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDLIM2Q96JY6 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PDLIM2Q96JY6 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PDLIM2Q96JY6 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDLIM2Q96JY6 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDLIM2Q96JY6 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.88■□□□□ 0.77
PDLIM2Q96JY6 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDLIM2Q96JY6 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
PDLIM2Q96JY6 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.88■□□□□ 0.77
PDLIM2Q96JY6 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDLIM2Q96JY6 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PDLIM2Q96JY6 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.88■□□□□ 0.77
PDLIM2Q96JY6 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDLIM2Q96JY6 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDLIM2Q96JY6 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PDLIM2Q96JY6 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDLIM2Q96JY6 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
PDLIM2Q96JY6 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDLIM2Q96JY6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDLIM2Q96JY6 AC022517.1-201ENST00000592429 346 ntBASIC19.88■□□□□ 0.77
PDLIM2Q96JY6 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
PDLIM2Q96JY6 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.88■□□□□ 0.77
PDLIM2Q96JY6 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDLIM2Q96JY6 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDLIM2Q96JY6 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19.88■□□□□ 0.77
PDLIM2Q96JY6 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDLIM2Q96JY6 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDLIM2Q96JY6 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDLIM2Q96JY6 AC078925.2-201ENST00000624013 1973 ntBASIC19.88■□□□□ 0.77
PDLIM2Q96JY6 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PDLIM2Q96JY6 AC092171.3-201ENST00000610122 2651 ntBASIC19.88■□□□□ 0.77
PDLIM2Q96JY6 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC19.88■□□□□ 0.77
PDLIM2Q96JY6 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDLIM2Q96JY6 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDLIM2Q96JY6 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PDLIM2Q96JY6 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC19.87■□□□□ 0.77
PDLIM2Q96JY6 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC19.87■□□□□ 0.77
PDLIM2Q96JY6 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
PDLIM2Q96JY6 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC19.87■□□□□ 0.77
PDLIM2Q96JY6 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.87■□□□□ 0.77
PDLIM2Q96JY6 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PDLIM2Q96JY6 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PDLIM2Q96JY6 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDLIM2Q96JY6 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDLIM2Q96JY6 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PDLIM2Q96JY6 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PDLIM2Q96JY6 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDLIM2Q96JY6 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDLIM2Q96JY6 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
PDLIM2Q96JY6 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDLIM2Q96JY6 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDLIM2Q96JY6 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
PDLIM2Q96JY6 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDLIM2Q96JY6 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDLIM2Q96JY6 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.87■□□□□ 0.77
PDLIM2Q96JY6 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDLIM2Q96JY6 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.87■□□□□ 0.77
PDLIM2Q96JY6 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms