Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
IFT43Q96FT9 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.56■□□□□ 0.56
IFT43Q96FT9 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
IFT43Q96FT9 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IFT43Q96FT9 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
IFT43Q96FT9 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.56■□□□□ 0.56
IFT43Q96FT9 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
IFT43Q96FT9 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
IFT43Q96FT9 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.56■□□□□ 0.56
IFT43Q96FT9 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
IFT43Q96FT9 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.56■□□□□ 0.56
IFT43Q96FT9 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
IFT43Q96FT9 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
IFT43Q96FT9 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
IFT43Q96FT9 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IFT43Q96FT9 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IFT43Q96FT9 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
IFT43Q96FT9 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.56■□□□□ 0.56
IFT43Q96FT9 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
IFT43Q96FT9 KRT18P56-201ENST00000507275 550 ntBASIC18.56■□□□□ 0.56
IFT43Q96FT9 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
IFT43Q96FT9 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
IFT43Q96FT9 AC069148.1-201ENST00000608741 768 ntBASIC18.56■□□□□ 0.56
IFT43Q96FT9 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IFT43Q96FT9 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
IFT43Q96FT9 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IFT43Q96FT9 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
IFT43Q96FT9 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IFT43Q96FT9 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.56■□□□□ 0.56
IFT43Q96FT9 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.56■□□□□ 0.56
IFT43Q96FT9 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.56■□□□□ 0.56
IFT43Q96FT9 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IFT43Q96FT9 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IFT43Q96FT9 AL162741.1-201ENST00000565563 1558 ntBASIC18.55■□□□□ 0.56
IFT43Q96FT9 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
IFT43Q96FT9 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.55■□□□□ 0.56
IFT43Q96FT9 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
IFT43Q96FT9 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
IFT43Q96FT9 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
IFT43Q96FT9 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
IFT43Q96FT9 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
IFT43Q96FT9 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.55■□□□□ 0.56
IFT43Q96FT9 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.55■□□□□ 0.56
IFT43Q96FT9 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.55■□□□□ 0.56
IFT43Q96FT9 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IFT43Q96FT9 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.55■□□□□ 0.56
IFT43Q96FT9 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.55■□□□□ 0.56
IFT43Q96FT9 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
IFT43Q96FT9 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.55■□□□□ 0.56
IFT43Q96FT9 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
IFT43Q96FT9 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IFT43Q96FT9 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IFT43Q96FT9 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.54■□□□□ 0.56
IFT43Q96FT9 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.54■□□□□ 0.56
IFT43Q96FT9 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
IFT43Q96FT9 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
IFT43Q96FT9 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.54■□□□□ 0.56
IFT43Q96FT9 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.54■□□□□ 0.56
IFT43Q96FT9 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IFT43Q96FT9 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IFT43Q96FT9 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
IFT43Q96FT9 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IFT43Q96FT9 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IFT43Q96FT9 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IFT43Q96FT9 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
IFT43Q96FT9 SPDYE15P-201ENST00000424157 909 ntBASIC18.54■□□□□ 0.56
IFT43Q96FT9 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.54■□□□□ 0.56
IFT43Q96FT9 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.54■□□□□ 0.56
IFT43Q96FT9 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.54■□□□□ 0.56
IFT43Q96FT9 AL157888.1-201ENST00000631930 593 ntBASIC18.54■□□□□ 0.56
IFT43Q96FT9 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
IFT43Q96FT9 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IFT43Q96FT9 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
IFT43Q96FT9 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
IFT43Q96FT9 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
IFT43Q96FT9 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
IFT43Q96FT9 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IFT43Q96FT9 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.54■□□□□ 0.56
IFT43Q96FT9 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IFT43Q96FT9 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.54■□□□□ 0.56
IFT43Q96FT9 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
IFT43Q96FT9 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
IFT43Q96FT9 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
IFT43Q96FT9 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
IFT43Q96FT9 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
IFT43Q96FT9 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IFT43Q96FT9 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
IFT43Q96FT9 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
IFT43Q96FT9 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
IFT43Q96FT9 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.53■□□□□ 0.56
IFT43Q96FT9 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
IFT43Q96FT9 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.53■□□□□ 0.56
IFT43Q96FT9 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
IFT43Q96FT9 ESPNP-201ENST00000270691 2015 ntBASIC18.53■□□□□ 0.56
IFT43Q96FT9 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IFT43Q96FT9 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
IFT43Q96FT9 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
IFT43Q96FT9 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
IFT43Q96FT9 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.53■□□□□ 0.56
IFT43Q96FT9 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms