Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PHTF2Q8N3S3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PHTF2Q8N3S3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PHTF2Q8N3S3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PHTF2Q8N3S3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PHTF2Q8N3S3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.61■□□□□ 0.57
PHTF2Q8N3S3 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
PHTF2Q8N3S3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PHTF2Q8N3S3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PHTF2Q8N3S3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PHTF2Q8N3S3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PHTF2Q8N3S3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PHTF2Q8N3S3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PHTF2Q8N3S3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.61■□□□□ 0.57
PHTF2Q8N3S3 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.61■□□□□ 0.57
PHTF2Q8N3S3 AC011840.4-201ENST00000578471 627 ntBASIC18.61■□□□□ 0.57
PHTF2Q8N3S3 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
PHTF2Q8N3S3 BNIP3P18-201ENST00000593976 575 ntBASIC18.61■□□□□ 0.57
PHTF2Q8N3S3 REXO1L6P-202ENST00000619970 1078 ntBASIC18.61■□□□□ 0.57
PHTF2Q8N3S3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.61■□□□□ 0.57
PHTF2Q8N3S3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.61■□□□□ 0.57
PHTF2Q8N3S3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PHTF2Q8N3S3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PHTF2Q8N3S3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PHTF2Q8N3S3 AP000997.3-201ENST00000623333 2250 ntBASIC18.61■□□□□ 0.57
PHTF2Q8N3S3 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PHTF2Q8N3S3 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PHTF2Q8N3S3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PHTF2Q8N3S3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PHTF2Q8N3S3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PHTF2Q8N3S3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PHTF2Q8N3S3 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PHTF2Q8N3S3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PHTF2Q8N3S3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
PHTF2Q8N3S3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.6■□□□□ 0.57
PHTF2Q8N3S3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PHTF2Q8N3S3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
PHTF2Q8N3S3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PHTF2Q8N3S3 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.6■□□□□ 0.57
PHTF2Q8N3S3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PHTF2Q8N3S3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PHTF2Q8N3S3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.6■□□□□ 0.57
PHTF2Q8N3S3 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PHTF2Q8N3S3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PHTF2Q8N3S3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PHTF2Q8N3S3 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PHTF2Q8N3S3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PHTF2Q8N3S3 NUS1P2-201ENST00000417358 873 ntBASIC18.6■□□□□ 0.57
PHTF2Q8N3S3 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.6■□□□□ 0.57
PHTF2Q8N3S3 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.6■□□□□ 0.57
PHTF2Q8N3S3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.6■□□□□ 0.57
PHTF2Q8N3S3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PHTF2Q8N3S3 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.6■□□□□ 0.57
PHTF2Q8N3S3 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.6■□□□□ 0.57
PHTF2Q8N3S3 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PHTF2Q8N3S3 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PHTF2Q8N3S3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PHTF2Q8N3S3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PHTF2Q8N3S3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PHTF2Q8N3S3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
PHTF2Q8N3S3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PHTF2Q8N3S3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.6■□□□□ 0.57
PHTF2Q8N3S3 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PHTF2Q8N3S3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PHTF2Q8N3S3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.59■□□□□ 0.57
PHTF2Q8N3S3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.59■□□□□ 0.57
PHTF2Q8N3S3 AC112777.1-201ENST00000540175 1423 ntBASIC18.59■□□□□ 0.57
PHTF2Q8N3S3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PHTF2Q8N3S3 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PHTF2Q8N3S3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PHTF2Q8N3S3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PHTF2Q8N3S3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.59■□□□□ 0.57
PHTF2Q8N3S3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PHTF2Q8N3S3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PHTF2Q8N3S3 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PHTF2Q8N3S3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PHTF2Q8N3S3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
PHTF2Q8N3S3 MRPL3P1-201ENST00000400109 1033 ntBASIC18.59■□□□□ 0.57
PHTF2Q8N3S3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.59■□□□□ 0.57
PHTF2Q8N3S3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.59■□□□□ 0.57
PHTF2Q8N3S3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.59■□□□□ 0.57
PHTF2Q8N3S3 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.59■□□□□ 0.57
PHTF2Q8N3S3 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PHTF2Q8N3S3 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.59■□□□□ 0.57
PHTF2Q8N3S3 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PHTF2Q8N3S3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.59■□□□□ 0.57
PHTF2Q8N3S3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PHTF2Q8N3S3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PHTF2Q8N3S3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PHTF2Q8N3S3 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PHTF2Q8N3S3 AC099343.3-201ENST00000605834 2503 ntBASIC18.59■□□□□ 0.57
PHTF2Q8N3S3 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PHTF2Q8N3S3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PHTF2Q8N3S3 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PHTF2Q8N3S3 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PHTF2Q8N3S3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
PHTF2Q8N3S3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
PHTF2Q8N3S3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
PHTF2Q8N3S3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.58■□□□□ 0.57
PHTF2Q8N3S3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms