Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC116Q8IYX3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC116Q8IYX3 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC116Q8IYX3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC116Q8IYX3 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC116Q8IYX3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC116Q8IYX3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CCDC116Q8IYX3 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC116Q8IYX3 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC116Q8IYX3 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 HBZP1-201ENST00000354915 429 ntBASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 FZD10-202ENST00000539839 3282 ntBASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 KRT89P-201ENST00000620027 1478 ntBASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC116Q8IYX3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC116Q8IYX3 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.97■□□□□ 0.31
CCDC116Q8IYX3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC116Q8IYX3 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC116Q8IYX3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.97■□□□□ 0.31
CCDC116Q8IYX3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC116Q8IYX3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC116Q8IYX3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC116Q8IYX3 LINC00167-201ENST00000530583 1419 ntBASIC16.97■□□□□ 0.31
CCDC116Q8IYX3 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC116Q8IYX3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC116Q8IYX3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
CCDC116Q8IYX3 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC116Q8IYX3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC116Q8IYX3 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC116Q8IYX3 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC116Q8IYX3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC116Q8IYX3 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.97■□□□□ 0.31
CCDC116Q8IYX3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC116Q8IYX3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.97■□□□□ 0.31
CCDC116Q8IYX3 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC116Q8IYX3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.97■□□□□ 0.31
CCDC116Q8IYX3 AC113404.2-201ENST00000507884 177 ntBASIC16.97■□□□□ 0.31
CCDC116Q8IYX3 DUTP2-201ENST00000519164 463 ntBASIC16.97■□□□□ 0.31
CCDC116Q8IYX3 ZNF444P1-201ENST00000559497 298 ntBASIC16.97■□□□□ 0.31
CCDC116Q8IYX3 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC116Q8IYX3 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.97■□□□□ 0.31
CCDC116Q8IYX3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.97■□□□□ 0.31
CCDC116Q8IYX3 HYMAI.1-201ENST00000620949 238 ntBASIC16.97■□□□□ 0.31
CCDC116Q8IYX3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CCDC116Q8IYX3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC116Q8IYX3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.97■□□□□ 0.31
CCDC116Q8IYX3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC116Q8IYX3 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC116Q8IYX3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CCDC116Q8IYX3 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC116Q8IYX3 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC116Q8IYX3 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC116Q8IYX3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC116Q8IYX3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC116Q8IYX3 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC116Q8IYX3 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC116Q8IYX3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
CCDC116Q8IYX3 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms