Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF440Q8IYI8 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.48■□□□□ 0.23
ZNF440Q8IYI8 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.48■□□□□ 0.23
ZNF440Q8IYI8 AC134043.2-201ENST00000624206 2238 ntBASIC16.48■□□□□ 0.23
ZNF440Q8IYI8 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF440Q8IYI8 AK4P3-201ENST00000418260 669 ntBASIC16.48■□□□□ 0.23
ZNF440Q8IYI8 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
ZNF440Q8IYI8 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF440Q8IYI8 KRT18P57-201ENST00000443599 1254 ntBASIC16.48■□□□□ 0.23
ZNF440Q8IYI8 AC092647.4-201ENST00000457211 535 ntBASIC16.48■□□□□ 0.23
ZNF440Q8IYI8 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF440Q8IYI8 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.48■□□□□ 0.23
ZNF440Q8IYI8 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.48■□□□□ 0.23
ZNF440Q8IYI8 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.48■□□□□ 0.23
ZNF440Q8IYI8 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.48■□□□□ 0.23
ZNF440Q8IYI8 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.48■□□□□ 0.23
ZNF440Q8IYI8 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
ZNF440Q8IYI8 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.48■□□□□ 0.23
ZNF440Q8IYI8 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.48■□□□□ 0.23
ZNF440Q8IYI8 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
ZNF440Q8IYI8 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF440Q8IYI8 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF440Q8IYI8 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.48■□□□□ 0.23
ZNF440Q8IYI8 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.48■□□□□ 0.23
ZNF440Q8IYI8 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
ZNF440Q8IYI8 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.48■□□□□ 0.23
ZNF440Q8IYI8 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF440Q8IYI8 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF440Q8IYI8 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.48■□□□□ 0.23
ZNF440Q8IYI8 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
ZNF440Q8IYI8 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF440Q8IYI8 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF440Q8IYI8 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
ZNF440Q8IYI8 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF440Q8IYI8 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF440Q8IYI8 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
ZNF440Q8IYI8 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.48■□□□□ 0.23
ZNF440Q8IYI8 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
ZNF440Q8IYI8 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF440Q8IYI8 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF440Q8IYI8 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF440Q8IYI8 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.47■□□□□ 0.23
ZNF440Q8IYI8 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
ZNF440Q8IYI8 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.47■□□□□ 0.23
ZNF440Q8IYI8 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
ZNF440Q8IYI8 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.47■□□□□ 0.23
ZNF440Q8IYI8 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.47■□□□□ 0.23
ZNF440Q8IYI8 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF440Q8IYI8 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.47■□□□□ 0.23
ZNF440Q8IYI8 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF440Q8IYI8 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF440Q8IYI8 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF440Q8IYI8 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF440Q8IYI8 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF440Q8IYI8 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
ZNF440Q8IYI8 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF440Q8IYI8 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF440Q8IYI8 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF440Q8IYI8 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF440Q8IYI8 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF440Q8IYI8 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF440Q8IYI8 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.47■□□□□ 0.23
ZNF440Q8IYI8 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF440Q8IYI8 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.47■□□□□ 0.23
ZNF440Q8IYI8 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF440Q8IYI8 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF440Q8IYI8 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.47■□□□□ 0.23
ZNF440Q8IYI8 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.47■□□□□ 0.23
ZNF440Q8IYI8 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.47■□□□□ 0.23
ZNF440Q8IYI8 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.47■□□□□ 0.23
ZNF440Q8IYI8 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.47■□□□□ 0.23
ZNF440Q8IYI8 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.47■□□□□ 0.23
ZNF440Q8IYI8 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
ZNF440Q8IYI8 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF440Q8IYI8 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF440Q8IYI8 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF440Q8IYI8 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF440Q8IYI8 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF440Q8IYI8 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.47■□□□□ 0.23
ZNF440Q8IYI8 AC006116.8-202ENST00000587620 1550 ntBASIC16.47■□□□□ 0.23
ZNF440Q8IYI8 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
ZNF440Q8IYI8 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF440Q8IYI8 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.46■□□□□ 0.23
ZNF440Q8IYI8 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.46■□□□□ 0.23
ZNF440Q8IYI8 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.46■□□□□ 0.23
ZNF440Q8IYI8 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF440Q8IYI8 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF440Q8IYI8 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF440Q8IYI8 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF440Q8IYI8 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF440Q8IYI8 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF440Q8IYI8 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.46■□□□□ 0.23
ZNF440Q8IYI8 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF440Q8IYI8 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.46■□□□□ 0.23
ZNF440Q8IYI8 ZNF444P1-201ENST00000559497 298 ntBASIC16.46■□□□□ 0.23
ZNF440Q8IYI8 LINC01238-205ENST00000567549 1107 ntBASIC16.46■□□□□ 0.23
ZNF440Q8IYI8 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.46■□□□□ 0.23
ZNF440Q8IYI8 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.46■□□□□ 0.23
ZNF440Q8IYI8 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.46■□□□□ 0.23
ZNF440Q8IYI8 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms