Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC25.4■■□□□ 1.66
UBR1Q8IWV7 AC003669.1-201ENST00000334569 611 ntBASIC25.4■■□□□ 1.66
UBR1Q8IWV7 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
UBR1Q8IWV7 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
UBR1Q8IWV7 AC096734.2-201ENST00000562054 433 ntBASIC25.4■■□□□ 1.66
UBR1Q8IWV7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC25.4■■□□□ 1.66
UBR1Q8IWV7 AJ011932.1-201ENST00000621707 465 ntBASIC25.4■■□□□ 1.66
UBR1Q8IWV7 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC25.4■■□□□ 1.66
UBR1Q8IWV7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
UBR1Q8IWV7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
UBR1Q8IWV7 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC25.4■■□□□ 1.66
UBR1Q8IWV7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC25.4■■□□□ 1.66
UBR1Q8IWV7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
UBR1Q8IWV7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC25.4■■□□□ 1.66
UBR1Q8IWV7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC25.4■■□□□ 1.66
UBR1Q8IWV7 GMCL1P1-201ENST00000463439 1581 ntBASIC25.4■■□□□ 1.66
UBR1Q8IWV7 AL049757.1-201ENST00000616842 1596 ntBASIC25.4■■□□□ 1.66
UBR1Q8IWV7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
UBR1Q8IWV7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC25.4■■□□□ 1.66
UBR1Q8IWV7 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
UBR1Q8IWV7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
UBR1Q8IWV7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
UBR1Q8IWV7 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
UBR1Q8IWV7 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
UBR1Q8IWV7 PNKD-204ENST00000436005 978 ntTSL 5 BASIC25.4■■□□□ 1.66
UBR1Q8IWV7 NKTR-203ENST00000442970 646 ntTSL 2 BASIC25.4■■□□□ 1.66
UBR1Q8IWV7 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC25.4■■□□□ 1.66
UBR1Q8IWV7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC25.4■■□□□ 1.66
UBR1Q8IWV7 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
UBR1Q8IWV7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
UBR1Q8IWV7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
UBR1Q8IWV7 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
UBR1Q8IWV7 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC25.39■■□□□ 1.66
UBR1Q8IWV7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
UBR1Q8IWV7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
UBR1Q8IWV7 AP002414.1-201ENST00000391405 1147 ntBASIC25.39■■□□□ 1.65
UBR1Q8IWV7 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
UBR1Q8IWV7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
UBR1Q8IWV7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.65
UBR1Q8IWV7 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
UBR1Q8IWV7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC25.39■■□□□ 1.65
UBR1Q8IWV7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC25.39■■□□□ 1.65
UBR1Q8IWV7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
UBR1Q8IWV7 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
UBR1Q8IWV7 CD99-202ENST00000381180 530 ntTSL 2 BASIC25.38■■□□□ 1.65
UBR1Q8IWV7 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
UBR1Q8IWV7 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
UBR1Q8IWV7 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC25.38■■□□□ 1.65
UBR1Q8IWV7 AL390955.2-201ENST00000603032 514 ntBASIC25.38■■□□□ 1.65
UBR1Q8IWV7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
UBR1Q8IWV7 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
UBR1Q8IWV7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC25.38■■□□□ 1.65
UBR1Q8IWV7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC25.38■■□□□ 1.65
UBR1Q8IWV7 AC007952.6-201ENST00000573168 2673 ntBASIC25.38■■□□□ 1.65
UBR1Q8IWV7 AC003957.1-201ENST00000625108 2673 ntBASIC25.38■■□□□ 1.65
UBR1Q8IWV7 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
UBR1Q8IWV7 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
UBR1Q8IWV7 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC25.37■■□□□ 1.65
UBR1Q8IWV7 AC138761.1-201ENST00000584393 385 ntBASIC25.37■■□□□ 1.65
UBR1Q8IWV7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
UBR1Q8IWV7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
UBR1Q8IWV7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
UBR1Q8IWV7 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
UBR1Q8IWV7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC25.37■■□□□ 1.65
UBR1Q8IWV7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
UBR1Q8IWV7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC25.37■■□□□ 1.65
UBR1Q8IWV7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
UBR1Q8IWV7 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC25.37■■□□□ 1.65
UBR1Q8IWV7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC25.37■■□□□ 1.65
UBR1Q8IWV7 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
UBR1Q8IWV7 Z92544.3-201ENST00000624747 417 ntBASIC25.37■■□□□ 1.65
UBR1Q8IWV7 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
UBR1Q8IWV7 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
UBR1Q8IWV7 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC25.37■■□□□ 1.65
UBR1Q8IWV7 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
UBR1Q8IWV7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC25.36■■□□□ 1.65
UBR1Q8IWV7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
UBR1Q8IWV7 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
UBR1Q8IWV7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
UBR1Q8IWV7 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
UBR1Q8IWV7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
UBR1Q8IWV7 HLA-J-202ENST00000469281 1241 ntBASIC25.36■■□□□ 1.65
UBR1Q8IWV7 SLBP-205ENST00000488267 987 ntTSL 2 BASIC25.36■■□□□ 1.65
UBR1Q8IWV7 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
UBR1Q8IWV7 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC25.36■■□□□ 1.65
UBR1Q8IWV7 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
UBR1Q8IWV7 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC25.36■■□□□ 1.65
UBR1Q8IWV7 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC25.36■■□□□ 1.65
UBR1Q8IWV7 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC25.36■■□□□ 1.65
UBR1Q8IWV7 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
UBR1Q8IWV7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
UBR1Q8IWV7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC25.35■■□□□ 1.65
UBR1Q8IWV7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
UBR1Q8IWV7 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
UBR1Q8IWV7 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
UBR1Q8IWV7 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
UBR1Q8IWV7 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC25.35■■□□□ 1.65
UBR1Q8IWV7 AC105339.1-204ENST00000636249 355 ntBASIC25.35■■□□□ 1.65
UBR1Q8IWV7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
UBR1Q8IWV7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms