Protein–RNA interactions for Protein: Q86WS4

C12orf40, Uncharacterized protein C12orf40, humanhuman

Predictions only

Length 652 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf40Q86WS4 AC025062.2-201ENST00000605477 670 ntBASIC18.27■□□□□ 0.52
C12orf40Q86WS4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.27■□□□□ 0.52
C12orf40Q86WS4 AC006538.3-201ENST00000612495 578 ntBASIC18.27■□□□□ 0.52
C12orf40Q86WS4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
C12orf40Q86WS4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
C12orf40Q86WS4 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.51
C12orf40Q86WS4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.27■□□□□ 0.51
C12orf40Q86WS4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
C12orf40Q86WS4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
C12orf40Q86WS4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
C12orf40Q86WS4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.26■□□□□ 0.51
C12orf40Q86WS4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.26■□□□□ 0.51
C12orf40Q86WS4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
C12orf40Q86WS4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
C12orf40Q86WS4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.26■□□□□ 0.51
C12orf40Q86WS4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
C12orf40Q86WS4 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.26■□□□□ 0.51
C12orf40Q86WS4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.26■□□□□ 0.51
C12orf40Q86WS4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
C12orf40Q86WS4 RPL13AP23-201ENST00000480739 586 ntBASIC18.26■□□□□ 0.51
C12orf40Q86WS4 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
C12orf40Q86WS4 AC012640.2-201ENST00000561606 901 ntBASIC18.26■□□□□ 0.51
C12orf40Q86WS4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.26■□□□□ 0.51
C12orf40Q86WS4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.26■□□□□ 0.51
C12orf40Q86WS4 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.26■□□□□ 0.51
C12orf40Q86WS4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
C12orf40Q86WS4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.26■□□□□ 0.51
C12orf40Q86WS4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C12orf40Q86WS4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C12orf40Q86WS4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C12orf40Q86WS4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
C12orf40Q86WS4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
C12orf40Q86WS4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
C12orf40Q86WS4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C12orf40Q86WS4 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
C12orf40Q86WS4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
C12orf40Q86WS4 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
C12orf40Q86WS4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
C12orf40Q86WS4 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
C12orf40Q86WS4 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
C12orf40Q86WS4 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
C12orf40Q86WS4 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
C12orf40Q86WS4 FAM220CP-201ENST00000395253 831 ntBASIC18.25■□□□□ 0.51
C12orf40Q86WS4 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
C12orf40Q86WS4 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.25■□□□□ 0.51
C12orf40Q86WS4 POLD2P1-201ENST00000511220 997 ntBASIC18.25■□□□□ 0.51
C12orf40Q86WS4 NKAPP1-205ENST00000585790 367 ntBASIC18.25■□□□□ 0.51
C12orf40Q86WS4 AP000867.4-201ENST00000641616 219 ntBASIC18.25■□□□□ 0.51
C12orf40Q86WS4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.25■□□□□ 0.51
C12orf40Q86WS4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.25■□□□□ 0.51
C12orf40Q86WS4 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
C12orf40Q86WS4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
C12orf40Q86WS4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
C12orf40Q86WS4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
C12orf40Q86WS4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
C12orf40Q86WS4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
C12orf40Q86WS4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
C12orf40Q86WS4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
C12orf40Q86WS4 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
C12orf40Q86WS4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
C12orf40Q86WS4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
C12orf40Q86WS4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.24■□□□□ 0.51
C12orf40Q86WS4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
C12orf40Q86WS4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
C12orf40Q86WS4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
C12orf40Q86WS4 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.24■□□□□ 0.51
C12orf40Q86WS4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.24■□□□□ 0.51
C12orf40Q86WS4 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
C12orf40Q86WS4 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.24■□□□□ 0.51
C12orf40Q86WS4 GPALPP1-207ENST00000611650 899 ntBASIC18.24■□□□□ 0.51
C12orf40Q86WS4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
C12orf40Q86WS4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
C12orf40Q86WS4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.24■□□□□ 0.51
C12orf40Q86WS4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
C12orf40Q86WS4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
C12orf40Q86WS4 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
C12orf40Q86WS4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
C12orf40Q86WS4 AC097374.2-201ENST00000618617 1306 ntBASIC18.23■□□□□ 0.51
C12orf40Q86WS4 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.23■□□□□ 0.51
C12orf40Q86WS4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
C12orf40Q86WS4 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C12orf40Q86WS4 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.23■□□□□ 0.51
C12orf40Q86WS4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
C12orf40Q86WS4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
C12orf40Q86WS4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C12orf40Q86WS4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
C12orf40Q86WS4 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C12orf40Q86WS4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
C12orf40Q86WS4 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.23■□□□□ 0.51
C12orf40Q86WS4 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.23■□□□□ 0.51
C12orf40Q86WS4 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
C12orf40Q86WS4 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
C12orf40Q86WS4 KRT18P58-201ENST00000527480 1120 ntBASIC18.23■□□□□ 0.51
C12orf40Q86WS4 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.23■□□□□ 0.51
C12orf40Q86WS4 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
C12orf40Q86WS4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.23■□□□□ 0.51
C12orf40Q86WS4 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
C12orf40Q86WS4 AL139288.1-201ENST00000623748 933 ntBASIC18.23■□□□□ 0.51
C12orf40Q86WS4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
C12orf40Q86WS4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms