Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LYSMD3Q7Z3D4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LYSMD3Q7Z3D4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
LYSMD3Q7Z3D4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.09■□□□□ 0.49
LYSMD3Q7Z3D4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LYSMD3Q7Z3D4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LYSMD3Q7Z3D4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LYSMD3Q7Z3D4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
LYSMD3Q7Z3D4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
LYSMD3Q7Z3D4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LYSMD3Q7Z3D4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LYSMD3Q7Z3D4 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
LYSMD3Q7Z3D4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LYSMD3Q7Z3D4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
LYSMD3Q7Z3D4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LYSMD3Q7Z3D4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LYSMD3Q7Z3D4 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LYSMD3Q7Z3D4 TSPY12P-201ENST00000421279 868 ntBASIC18.08■□□□□ 0.48
LYSMD3Q7Z3D4 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
LYSMD3Q7Z3D4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LYSMD3Q7Z3D4 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.08■□□□□ 0.48
LYSMD3Q7Z3D4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.08■□□□□ 0.48
LYSMD3Q7Z3D4 KRT8P26-201ENST00000534154 1276 ntBASIC18.08■□□□□ 0.48
LYSMD3Q7Z3D4 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.08■□□□□ 0.48
LYSMD3Q7Z3D4 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
LYSMD3Q7Z3D4 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
LYSMD3Q7Z3D4 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.08■□□□□ 0.48
LYSMD3Q7Z3D4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LYSMD3Q7Z3D4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
LYSMD3Q7Z3D4 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LYSMD3Q7Z3D4 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
LYSMD3Q7Z3D4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LYSMD3Q7Z3D4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LYSMD3Q7Z3D4 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
LYSMD3Q7Z3D4 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LYSMD3Q7Z3D4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.08■□□□□ 0.48
LYSMD3Q7Z3D4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LYSMD3Q7Z3D4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
LYSMD3Q7Z3D4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LYSMD3Q7Z3D4 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.08■□□□□ 0.48
LYSMD3Q7Z3D4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LYSMD3Q7Z3D4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LYSMD3Q7Z3D4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LYSMD3Q7Z3D4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LYSMD3Q7Z3D4 AC068880.1-201ENST00000507289 2297 ntBASIC18.07■□□□□ 0.48
LYSMD3Q7Z3D4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
LYSMD3Q7Z3D4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.07■□□□□ 0.48
LYSMD3Q7Z3D4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.07■□□□□ 0.48
LYSMD3Q7Z3D4 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LYSMD3Q7Z3D4 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LYSMD3Q7Z3D4 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LYSMD3Q7Z3D4 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LYSMD3Q7Z3D4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LYSMD3Q7Z3D4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LYSMD3Q7Z3D4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LYSMD3Q7Z3D4 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.07■□□□□ 0.48
LYSMD3Q7Z3D4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.07■□□□□ 0.48
LYSMD3Q7Z3D4 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.07■□□□□ 0.48
LYSMD3Q7Z3D4 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LYSMD3Q7Z3D4 BX276092.5-203ENST00000456199 560 ntBASIC18.07■□□□□ 0.48
LYSMD3Q7Z3D4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.07■□□□□ 0.48
LYSMD3Q7Z3D4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.07■□□□□ 0.48
LYSMD3Q7Z3D4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.07■□□□□ 0.48
LYSMD3Q7Z3D4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LYSMD3Q7Z3D4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LYSMD3Q7Z3D4 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.07■□□□□ 0.48
LYSMD3Q7Z3D4 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LYSMD3Q7Z3D4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LYSMD3Q7Z3D4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LYSMD3Q7Z3D4 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LYSMD3Q7Z3D4 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.07■□□□□ 0.48
LYSMD3Q7Z3D4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LYSMD3Q7Z3D4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.07■□□□□ 0.48
LYSMD3Q7Z3D4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.07■□□□□ 0.48
LYSMD3Q7Z3D4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.07■□□□□ 0.48
LYSMD3Q7Z3D4 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
LYSMD3Q7Z3D4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LYSMD3Q7Z3D4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LYSMD3Q7Z3D4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.06■□□□□ 0.48
LYSMD3Q7Z3D4 AC016734.2-201ENST00000624325 1377 ntBASIC18.06■□□□□ 0.48
LYSMD3Q7Z3D4 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.06■□□□□ 0.48
LYSMD3Q7Z3D4 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LYSMD3Q7Z3D4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LYSMD3Q7Z3D4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.06■□□□□ 0.48
LYSMD3Q7Z3D4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
LYSMD3Q7Z3D4 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LYSMD3Q7Z3D4 KRT18P65-201ENST00000439811 1286 ntBASIC18.06■□□□□ 0.48
LYSMD3Q7Z3D4 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
LYSMD3Q7Z3D4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.06■□□□□ 0.48
LYSMD3Q7Z3D4 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.06■□□□□ 0.48
LYSMD3Q7Z3D4 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LYSMD3Q7Z3D4 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.06■□□□□ 0.48
LYSMD3Q7Z3D4 AL121672.3-201ENST00000608644 468 ntBASIC18.06■□□□□ 0.48
LYSMD3Q7Z3D4 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LYSMD3Q7Z3D4 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.06■□□□□ 0.48
LYSMD3Q7Z3D4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.06■□□□□ 0.48
LYSMD3Q7Z3D4 AC138028.4-201ENST00000564984 1845 ntBASIC18.06■□□□□ 0.48
LYSMD3Q7Z3D4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LYSMD3Q7Z3D4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LYSMD3Q7Z3D4 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms