Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS13CQ709C8 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VPS13CQ709C8 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.91□□□□□ -0.02
VPS13CQ709C8 MKNK2P1-201ENST00000437526 628 ntBASIC14.91□□□□□ -0.02
VPS13CQ709C8 AC108073.2-201ENST00000464002 357 ntBASIC14.91□□□□□ -0.02
VPS13CQ709C8 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.91□□□□□ -0.02
VPS13CQ709C8 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.91□□□□□ -0.02
VPS13CQ709C8 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.91□□□□□ -0.02
VPS13CQ709C8 AC093512.1-201ENST00000617969 520 ntBASIC14.91□□□□□ -0.02
VPS13CQ709C8 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.91□□□□□ -0.02
VPS13CQ709C8 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC14.91□□□□□ -0.02
VPS13CQ709C8 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS13CQ709C8 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.91□□□□□ -0.02
VPS13CQ709C8 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS13CQ709C8 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS13CQ709C8 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC14.91□□□□□ -0.02
VPS13CQ709C8 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS13CQ709C8 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS13CQ709C8 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.9□□□□□ -0.02
VPS13CQ709C8 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.9□□□□□ -0.02
VPS13CQ709C8 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.9□□□□□ -0.02
VPS13CQ709C8 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.9□□□□□ -0.02
VPS13CQ709C8 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.9□□□□□ -0.02
VPS13CQ709C8 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.9□□□□□ -0.02
VPS13CQ709C8 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC14.9□□□□□ -0.02
VPS13CQ709C8 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VPS13CQ709C8 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.9□□□□□ -0.02
VPS13CQ709C8 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPS13CQ709C8 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
VPS13CQ709C8 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.9□□□□□ -0.02
VPS13CQ709C8 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VPS13CQ709C8 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.9□□□□□ -0.02
VPS13CQ709C8 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.9□□□□□ -0.02
VPS13CQ709C8 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.9□□□□□ -0.02
VPS13CQ709C8 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VPS13CQ709C8 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPS13CQ709C8 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.9□□□□□ -0.02
VPS13CQ709C8 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.9□□□□□ -0.02
VPS13CQ709C8 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPS13CQ709C8 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPS13CQ709C8 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPS13CQ709C8 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.9□□□□□ -0.02
VPS13CQ709C8 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.9□□□□□ -0.02
VPS13CQ709C8 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPS13CQ709C8 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
VPS13CQ709C8 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS13CQ709C8 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS13CQ709C8 UGT1A2P-201ENST00000454886 866 ntBASIC14.89□□□□□ -0.03
VPS13CQ709C8 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
VPS13CQ709C8 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
VPS13CQ709C8 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
VPS13CQ709C8 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VPS13CQ709C8 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.89□□□□□ -0.03
VPS13CQ709C8 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS13CQ709C8 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC14.89□□□□□ -0.03
VPS13CQ709C8 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.89□□□□□ -0.03
VPS13CQ709C8 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
VPS13CQ709C8 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC14.89□□□□□ -0.03
VPS13CQ709C8 AC100803.2-201ENST00000562459 1963 ntBASIC14.89□□□□□ -0.03
VPS13CQ709C8 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.89□□□□□ -0.03
VPS13CQ709C8 AC005498.2-205ENST00000593218 784 ntBASIC14.89□□□□□ -0.03
VPS13CQ709C8 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
VPS13CQ709C8 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS13CQ709C8 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS13CQ709C8 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS13CQ709C8 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS13CQ709C8 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC14.89□□□□□ -0.03
VPS13CQ709C8 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.89□□□□□ -0.03
VPS13CQ709C8 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
VPS13CQ709C8 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.89□□□□□ -0.03
VPS13CQ709C8 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
VPS13CQ709C8 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VPS13CQ709C8 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.89□□□□□ -0.03
VPS13CQ709C8 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.89□□□□□ -0.03
VPS13CQ709C8 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.89□□□□□ -0.03
VPS13CQ709C8 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS13CQ709C8 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VPS13CQ709C8 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
VPS13CQ709C8 AC116562.4-201ENST00000641316 2276 ntBASIC14.89□□□□□ -0.03
VPS13CQ709C8 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS13CQ709C8 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS13CQ709C8 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS13CQ709C8 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPS13CQ709C8 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS13CQ709C8 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS13CQ709C8 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VPS13CQ709C8 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.88□□□□□ -0.03
VPS13CQ709C8 SNHG9-202ENST00000564014 471 ntBASIC14.88□□□□□ -0.03
VPS13CQ709C8 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.88□□□□□ -0.03
VPS13CQ709C8 AC004706.3-202ENST00000621574 984 ntBASIC14.88□□□□□ -0.03
VPS13CQ709C8 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.88□□□□□ -0.03
VPS13CQ709C8 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
VPS13CQ709C8 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.88□□□□□ -0.03
VPS13CQ709C8 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VPS13CQ709C8 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.88□□□□□ -0.03
VPS13CQ709C8 AC136632.2-201ENST00000512891 861 ntBASIC14.88□□□□□ -0.03
VPS13CQ709C8 AC011467.4-201ENST00000594891 528 ntBASIC14.88□□□□□ -0.03
VPS13CQ709C8 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VPS13CQ709C8 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS13CQ709C8 AC104581.1-202ENST00000635932 2618 ntBASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms