Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.76■□□□□ 0.59
TTC39BQ5VTQ0 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
TTC39BQ5VTQ0 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TTC39BQ5VTQ0 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TTC39BQ5VTQ0 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TTC39BQ5VTQ0 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.76■□□□□ 0.59
TTC39BQ5VTQ0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TTC39BQ5VTQ0 AC135776.1-201ENST00000319817 2481 ntBASIC18.76■□□□□ 0.59
TTC39BQ5VTQ0 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TTC39BQ5VTQ0 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.76■□□□□ 0.59
TTC39BQ5VTQ0 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TTC39BQ5VTQ0 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TTC39BQ5VTQ0 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TTC39BQ5VTQ0 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TTC39BQ5VTQ0 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TTC39BQ5VTQ0 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TTC39BQ5VTQ0 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.76■□□□□ 0.59
TTC39BQ5VTQ0 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TTC39BQ5VTQ0 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TTC39BQ5VTQ0 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TTC39BQ5VTQ0 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TTC39BQ5VTQ0 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TTC39BQ5VTQ0 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TTC39BQ5VTQ0 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TTC39BQ5VTQ0 GMCL1P1-201ENST00000463439 1581 ntBASIC18.76■□□□□ 0.59
TTC39BQ5VTQ0 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TTC39BQ5VTQ0 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TTC39BQ5VTQ0 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.76■□□□□ 0.59
TTC39BQ5VTQ0 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TTC39BQ5VTQ0 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TTC39BQ5VTQ0 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TTC39BQ5VTQ0 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TTC39BQ5VTQ0 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.75■□□□□ 0.59
TTC39BQ5VTQ0 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
TTC39BQ5VTQ0 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TTC39BQ5VTQ0 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TTC39BQ5VTQ0 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TTC39BQ5VTQ0 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.75■□□□□ 0.59
TTC39BQ5VTQ0 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TTC39BQ5VTQ0 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TTC39BQ5VTQ0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.75■□□□□ 0.59
TTC39BQ5VTQ0 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TTC39BQ5VTQ0 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.75■□□□□ 0.59
TTC39BQ5VTQ0 CHCHD2P8-201ENST00000429873 447 ntBASIC18.75■□□□□ 0.59
TTC39BQ5VTQ0 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.75■□□□□ 0.59
TTC39BQ5VTQ0 TSSC2-201ENST00000450217 709 ntBASIC18.75■□□□□ 0.59
TTC39BQ5VTQ0 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TTC39BQ5VTQ0 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.75■□□□□ 0.59
TTC39BQ5VTQ0 LTB4R2-202ENST00000528054 3092 ntBASIC18.75■□□□□ 0.59
TTC39BQ5VTQ0 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TTC39BQ5VTQ0 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TTC39BQ5VTQ0 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TTC39BQ5VTQ0 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TTC39BQ5VTQ0 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TTC39BQ5VTQ0 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TTC39BQ5VTQ0 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TTC39BQ5VTQ0 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TTC39BQ5VTQ0 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TTC39BQ5VTQ0 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TTC39BQ5VTQ0 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TTC39BQ5VTQ0 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TTC39BQ5VTQ0 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TTC39BQ5VTQ0 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
TTC39BQ5VTQ0 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TTC39BQ5VTQ0 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TTC39BQ5VTQ0 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TTC39BQ5VTQ0 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TTC39BQ5VTQ0 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
TTC39BQ5VTQ0 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TTC39BQ5VTQ0 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TTC39BQ5VTQ0 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TTC39BQ5VTQ0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TTC39BQ5VTQ0 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TTC39BQ5VTQ0 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TTC39BQ5VTQ0 ATP5G2P1-201ENST00000433580 426 ntBASIC18.74■□□□□ 0.59
TTC39BQ5VTQ0 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.74■□□□□ 0.59
TTC39BQ5VTQ0 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.74■□□□□ 0.59
TTC39BQ5VTQ0 AC090616.6-201ENST00000582640 721 ntBASIC18.74■□□□□ 0.59
TTC39BQ5VTQ0 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.74■□□□□ 0.59
TTC39BQ5VTQ0 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.74■□□□□ 0.59
TTC39BQ5VTQ0 AC093458.2-201ENST00000623150 629 ntBASIC18.74■□□□□ 0.59
TTC39BQ5VTQ0 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TTC39BQ5VTQ0 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.74■□□□□ 0.59
TTC39BQ5VTQ0 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TTC39BQ5VTQ0 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TTC39BQ5VTQ0 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TTC39BQ5VTQ0 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TTC39BQ5VTQ0 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TTC39BQ5VTQ0 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TTC39BQ5VTQ0 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.74■□□□□ 0.59
TTC39BQ5VTQ0 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TTC39BQ5VTQ0 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TTC39BQ5VTQ0 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
TTC39BQ5VTQ0 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TTC39BQ5VTQ0 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TTC39BQ5VTQ0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TTC39BQ5VTQ0 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TTC39BQ5VTQ0 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TTC39BQ5VTQ0 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TTC39BQ5VTQ0 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms