Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 AC211429.1-201ENST00000415277 523 ntBASIC18.21■□□□□ 0.51
CDH17Q12864 AC117947.1-201ENST00000427448 529 ntBASIC18.21■□□□□ 0.51
CDH17Q12864 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDH17Q12864 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CDH17Q12864 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.21■□□□□ 0.51
CDH17Q12864 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.21■□□□□ 0.51
CDH17Q12864 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.21■□□□□ 0.51
CDH17Q12864 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH17Q12864 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.21■□□□□ 0.51
CDH17Q12864 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.21■□□□□ 0.51
CDH17Q12864 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.21■□□□□ 0.51
CDH17Q12864 LINC01023-201ENST00000606054 436 ntBASIC18.21■□□□□ 0.51
CDH17Q12864 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.21■□□□□ 0.51
CDH17Q12864 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH17Q12864 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH17Q12864 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH17Q12864 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CDH17Q12864 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
CDH17Q12864 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CDH17Q12864 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDH17Q12864 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH17Q12864 OR6D1P-202ENST00000641007 5290 ntBASIC18.21■□□□□ 0.5
CDH17Q12864 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.2■□□□□ 0.5
CDH17Q12864 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
CDH17Q12864 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDH17Q12864 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.2■□□□□ 0.5
CDH17Q12864 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.2■□□□□ 0.5
CDH17Q12864 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CDH17Q12864 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH17Q12864 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.2■□□□□ 0.5
CDH17Q12864 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CDH17Q12864 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDH17Q12864 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH17Q12864 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.2■□□□□ 0.5
CDH17Q12864 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH17Q12864 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH17Q12864 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH17Q12864 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
CDH17Q12864 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH17Q12864 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH17Q12864 FAM8A6P-201ENST00000407496 1135 ntBASIC18.2■□□□□ 0.5
CDH17Q12864 HLA-F-220ENST00000434407 884 ntBASIC18.2■□□□□ 0.5
CDH17Q12864 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.2■□□□□ 0.5
CDH17Q12864 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.2■□□□□ 0.5
CDH17Q12864 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.2■□□□□ 0.5
CDH17Q12864 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.2■□□□□ 0.5
CDH17Q12864 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CDH17Q12864 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CDH17Q12864 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH17Q12864 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CDH17Q12864 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.2■□□□□ 0.5
CDH17Q12864 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH17Q12864 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.2■□□□□ 0.5
CDH17Q12864 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.2■□□□□ 0.5
CDH17Q12864 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH17Q12864 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDH17Q12864 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
CDH17Q12864 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH17Q12864 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH17Q12864 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CDH17Q12864 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH17Q12864 AC100803.2-201ENST00000562459 1963 ntBASIC18.19■□□□□ 0.5
CDH17Q12864 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CDH17Q12864 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH17Q12864 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH17Q12864 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.19■□□□□ 0.5
CDH17Q12864 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH17Q12864 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.19■□□□□ 0.5
CDH17Q12864 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CDH17Q12864 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
CDH17Q12864 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.19■□□□□ 0.5
CDH17Q12864 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH17Q12864 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH17Q12864 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH17Q12864 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH17Q12864 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH17Q12864 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH17Q12864 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.19■□□□□ 0.5
CDH17Q12864 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.19■□□□□ 0.5
CDH17Q12864 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.19■□□□□ 0.5
CDH17Q12864 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH17Q12864 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH17Q12864 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH17Q12864 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDH17Q12864 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.19■□□□□ 0.5
CDH17Q12864 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
CDH17Q12864 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH17Q12864 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH17Q12864 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH17Q12864 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH17Q12864 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH17Q12864 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH17Q12864 KRT18P48-201ENST00000434763 852 ntBASIC18.18■□□□□ 0.5
CDH17Q12864 KRT18P57-201ENST00000443599 1254 ntBASIC18.18■□□□□ 0.5
CDH17Q12864 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.18■□□□□ 0.5
CDH17Q12864 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CDH17Q12864 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CDH17Q12864 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.18■□□□□ 0.5
CDH17Q12864 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH17Q12864 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms