Protein–RNA interactions for Protein: Q00059

TFAM, Transcription factor A, mitochondrial, humanhuman

Known RBP Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFAMQ00059 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.45■□□□□ 0.7
TFAMQ00059 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.45■□□□□ 0.7
TFAMQ00059 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TFAMQ00059 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TFAMQ00059 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.45■□□□□ 0.7
TFAMQ00059 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TFAMQ00059 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TFAMQ00059 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TFAMQ00059 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TFAMQ00059 AL845331.1-201ENST00000424978 1190 ntBASIC19.45■□□□□ 0.7
TFAMQ00059 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.45■□□□□ 0.7
TFAMQ00059 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.45■□□□□ 0.7
TFAMQ00059 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TFAMQ00059 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.45■□□□□ 0.7
TFAMQ00059 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.45■□□□□ 0.7
TFAMQ00059 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TFAMQ00059 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TFAMQ00059 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TFAMQ00059 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TFAMQ00059 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TFAMQ00059 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TFAMQ00059 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.45■□□□□ 0.7
TFAMQ00059 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TFAMQ00059 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TFAMQ00059 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TFAMQ00059 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TFAMQ00059 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.44■□□□□ 0.7
TFAMQ00059 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TFAMQ00059 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TFAMQ00059 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TFAMQ00059 AP000997.3-201ENST00000623333 2250 ntBASIC19.44■□□□□ 0.7
TFAMQ00059 AL354751.1-201ENST00000412768 1863 ntBASIC19.44■□□□□ 0.7
TFAMQ00059 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.44■□□□□ 0.7
TFAMQ00059 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.44■□□□□ 0.7
TFAMQ00059 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TFAMQ00059 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TFAMQ00059 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.44■□□□□ 0.7
TFAMQ00059 KRT18P56-201ENST00000507275 550 ntBASIC19.44■□□□□ 0.7
TFAMQ00059 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.44■□□□□ 0.7
TFAMQ00059 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.44■□□□□ 0.7
TFAMQ00059 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TFAMQ00059 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.44■□□□□ 0.7
TFAMQ00059 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TFAMQ00059 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TFAMQ00059 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.44■□□□□ 0.7
TFAMQ00059 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TFAMQ00059 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TFAMQ00059 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TFAMQ00059 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TFAMQ00059 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TFAMQ00059 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TFAMQ00059 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
TFAMQ00059 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.44■□□□□ 0.7
TFAMQ00059 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.44■□□□□ 0.7
TFAMQ00059 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TFAMQ00059 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.44■□□□□ 0.7
TFAMQ00059 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
TFAMQ00059 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.44■□□□□ 0.7
TFAMQ00059 AC233702.3-201ENST00000578656 1387 ntBASIC19.44■□□□□ 0.7
TFAMQ00059 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TFAMQ00059 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.43■□□□□ 0.7
TFAMQ00059 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TFAMQ00059 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TFAMQ00059 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TFAMQ00059 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TFAMQ00059 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TFAMQ00059 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TFAMQ00059 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TFAMQ00059 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.43■□□□□ 0.7
TFAMQ00059 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TFAMQ00059 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TFAMQ00059 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TFAMQ00059 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.43■□□□□ 0.7
TFAMQ00059 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.43■□□□□ 0.7
TFAMQ00059 VENTXP7-201ENST00000475503 772 ntBASIC19.43■□□□□ 0.7
TFAMQ00059 AC091607.1-201ENST00000490318 1060 ntBASIC19.43■□□□□ 0.7
TFAMQ00059 DUTP2-201ENST00000519164 463 ntBASIC19.43■□□□□ 0.7
TFAMQ00059 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.43■□□□□ 0.7
TFAMQ00059 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TFAMQ00059 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.43■□□□□ 0.7
TFAMQ00059 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TFAMQ00059 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TFAMQ00059 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TFAMQ00059 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TFAMQ00059 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.43■□□□□ 0.7
TFAMQ00059 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TFAMQ00059 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.43■□□□□ 0.7
TFAMQ00059 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TFAMQ00059 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TFAMQ00059 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TFAMQ00059 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TFAMQ00059 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TFAMQ00059 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TFAMQ00059 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.42■□□□□ 0.7
TFAMQ00059 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.42■□□□□ 0.7
TFAMQ00059 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TFAMQ00059 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.42■□□□□ 0.7
TFAMQ00059 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TFAMQ00059 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TFAMQ00059 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms