Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SPCS3P61009 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SPCS3P61009 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SPCS3P61009 AC012317.2-201ENST00000623305 2251 ntBASIC14.68□□□□□ -0.06
SPCS3P61009 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SPCS3P61009 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
SPCS3P61009 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SPCS3P61009 AL163051.1-201ENST00000569214 1512 ntBASIC14.68□□□□□ -0.06
SPCS3P61009 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SPCS3P61009 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SPCS3P61009 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SPCS3P61009 MIR149-201ENST00000384879 89 ntBASIC14.68□□□□□ -0.06
SPCS3P61009 AC006058.3-201ENST00000606217 1069 ntBASIC14.68□□□□□ -0.06
SPCS3P61009 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC14.68□□□□□ -0.06
SPCS3P61009 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SPCS3P61009 AC096733.2-201ENST00000609937 1394 ntBASIC14.68□□□□□ -0.06
SPCS3P61009 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC14.68□□□□□ -0.06
SPCS3P61009 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SPCS3P61009 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.68□□□□□ -0.06
SPCS3P61009 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.68□□□□□ -0.06
SPCS3P61009 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SPCS3P61009 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SPCS3P61009 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SPCS3P61009 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SPCS3P61009 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SPCS3P61009 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
SPCS3P61009 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SPCS3P61009 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SPCS3P61009 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPCS3P61009 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SPCS3P61009 PKD1P5-201ENST00000532415 10291 ntBASIC14.67□□□□□ -0.06
SPCS3P61009 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPCS3P61009 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
SPCS3P61009 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
SPCS3P61009 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPCS3P61009 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SPCS3P61009 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPCS3P61009 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPCS3P61009 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SPCS3P61009 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPCS3P61009 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
SPCS3P61009 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPCS3P61009 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
SPCS3P61009 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPCS3P61009 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SPCS3P61009 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPCS3P61009 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPCS3P61009 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC14.67□□□□□ -0.06
SPCS3P61009 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC14.67□□□□□ -0.06
SPCS3P61009 C1QBPP2-201ENST00000528754 825 ntBASIC14.67□□□□□ -0.06
SPCS3P61009 RNF121-214ENST00000533380 870 ntTSL 3 BASIC14.67□□□□□ -0.06
SPCS3P61009 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC14.67□□□□□ -0.06
SPCS3P61009 MIR3180-5-201ENST00000583743 153 ntBASIC14.67□□□□□ -0.06
SPCS3P61009 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPCS3P61009 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPCS3P61009 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPCS3P61009 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SPCS3P61009 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPCS3P61009 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SPCS3P61009 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SPCS3P61009 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPCS3P61009 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.67□□□□□ -0.06
SPCS3P61009 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPCS3P61009 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC14.67□□□□□ -0.06
SPCS3P61009 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SPCS3P61009 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SPCS3P61009 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SPCS3P61009 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC14.67□□□□□ -0.06
SPCS3P61009 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPCS3P61009 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SPCS3P61009 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SPCS3P61009 CYP51A1P1-201ENST00000492267 1507 ntBASIC14.66□□□□□ -0.06
SPCS3P61009 KRT18P55-202ENST00000578578 1546 ntBASIC14.66□□□□□ -0.06
SPCS3P61009 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SPCS3P61009 SDHAP2-201ENST00000455183 2001 ntBASIC14.66□□□□□ -0.06
SPCS3P61009 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPCS3P61009 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPCS3P61009 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SPCS3P61009 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPCS3P61009 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
SPCS3P61009 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPCS3P61009 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPCS3P61009 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPCS3P61009 NARF-204ENST00000390006 1766 ntTSL 2 BASIC14.66□□□□□ -0.06
SPCS3P61009 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SPCS3P61009 AC006116.8-202ENST00000587620 1550 ntBASIC14.66□□□□□ -0.06
SPCS3P61009 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC14.66□□□□□ -0.06
SPCS3P61009 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SPCS3P61009 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPCS3P61009 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SPCS3P61009 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC14.66□□□□□ -0.06
SPCS3P61009 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SPCS3P61009 CA15P1-201ENST00000481698 905 ntBASIC14.66□□□□□ -0.06
SPCS3P61009 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC14.66□□□□□ -0.06
SPCS3P61009 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPCS3P61009 DGCR10-201ENST00000609839 495 ntBASIC14.66□□□□□ -0.06
SPCS3P61009 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPCS3P61009 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SPCS3P61009 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPCS3P61009 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms