Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RAB38P57729 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB38P57729 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.92■□□□□ 0.3
RAB38P57729 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.92■□□□□ 0.3
RAB38P57729 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.92■□□□□ 0.3
RAB38P57729 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.92■□□□□ 0.3
RAB38P57729 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
RAB38P57729 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB38P57729 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB38P57729 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB38P57729 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
RAB38P57729 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB38P57729 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RAB38P57729 KRT18P55-202ENST00000578578 1546 ntBASIC16.91■□□□□ 0.3
RAB38P57729 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB38P57729 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.91■□□□□ 0.3
RAB38P57729 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB38P57729 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB38P57729 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RAB38P57729 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB38P57729 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.91■□□□□ 0.3
RAB38P57729 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB38P57729 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.91■□□□□ 0.3
RAB38P57729 AC246785.2-201ENST00000432512 513 ntBASIC16.91■□□□□ 0.3
RAB38P57729 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.91■□□□□ 0.3
RAB38P57729 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB38P57729 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB38P57729 MIR3180-1-201ENST00000580374 94 ntBASIC16.91■□□□□ 0.3
RAB38P57729 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.91■□□□□ 0.3
RAB38P57729 MIR3180-3-201ENST00000584616 94 ntBASIC16.91■□□□□ 0.3
RAB38P57729 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.91■□□□□ 0.3
RAB38P57729 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.91■□□□□ 0.3
RAB38P57729 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RAB38P57729 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB38P57729 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB38P57729 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.91■□□□□ 0.3
RAB38P57729 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.91■□□□□ 0.3
RAB38P57729 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB38P57729 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB38P57729 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB38P57729 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB38P57729 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB38P57729 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB38P57729 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB38P57729 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB38P57729 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.91■□□□□ 0.3
RAB38P57729 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB38P57729 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB38P57729 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.9■□□□□ 0.3
RAB38P57729 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB38P57729 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RAB38P57729 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB38P57729 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB38P57729 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
RAB38P57729 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB38P57729 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB38P57729 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB38P57729 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
RAB38P57729 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB38P57729 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB38P57729 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB38P57729 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB38P57729 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB38P57729 AL845331.1-201ENST00000424978 1190 ntBASIC16.9■□□□□ 0.3
RAB38P57729 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.9■□□□□ 0.3
RAB38P57729 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.9■□□□□ 0.3
RAB38P57729 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.9■□□□□ 0.3
RAB38P57729 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.9■□□□□ 0.3
RAB38P57729 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB38P57729 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.9■□□□□ 0.3
RAB38P57729 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RAB38P57729 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB38P57729 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB38P57729 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RAB38P57729 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RAB38P57729 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RAB38P57729 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAB38P57729 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RAB38P57729 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB38P57729 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAB38P57729 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB38P57729 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
RAB38P57729 KRT8P47-201ENST00000604727 1398 ntBASIC16.89■□□□□ 0.3
RAB38P57729 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RAB38P57729 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RAB38P57729 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RAB38P57729 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RAB38P57729 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RAB38P57729 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.89■□□□□ 0.3
RAB38P57729 NOC2LP1-202ENST00000452600 2235 ntBASIC16.89■□□□□ 0.29
RAB38P57729 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB38P57729 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.89■□□□□ 0.29
RAB38P57729 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.89■□□□□ 0.29
RAB38P57729 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB38P57729 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RAB38P57729 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB38P57729 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB38P57729 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB38P57729 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB38P57729 SLC25A6P5-201ENST00000435663 894 ntBASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms